CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s15530
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0002s15530
T295220_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s15530.1
NAC/NAM
15
144
PVGFRFHPTHEELINHYLVPKTRGDNVEDLLLMAEVNLCKHEPWDLPDKSIMKSDDQAWYFFCRRELKNSNRKCSNRRTKAGFWKSTCQEKPIKTKHTKKVIGIRKTLVFHEKAGPKAKRTGWIIDEYDN
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00067p00064350
Amborella trichopoda
AMTR_s00067p00064350
N
0.935
Ca_13537
Cicer arietinum
Ca_13537
N
0.881
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.871
Eucgr.A00437
Eucalyptus grandis
Eucgr.A00437
N
0.892
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.884
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.934
GSMUA_Achr11G22760_001
Musa acuminata
GSMUA_Achr11G22760_001
N
0.901
GSMUA_Achr6G36550_001
Musa acuminata
GSMUA_Achr6G36550_001
N
0.890
GSMUA_AchrUn_randomG17260_001
Musa acuminata
GSMUA_AchrUn_randomG17260_001
N
0.913
MDP0000298182
Malus domestica
MDP0000298182
N
0.908
OMERI03G00460
Oryza meridionalis
OMERI03G00460
N
0.952
PK23481.1
Cannabis sativa
PK23481.1
N
0.928
Pm011234
Prunus mume
Pm011234
N
0.897
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.931
SapurV1A.0024s0350
Salix purpurea
SapurV1A.0024s0350
N
0.981
SapurV1A.0024s0360
Salix purpurea
SapurV1A.0024s0360
N
0.994
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.906
SapurV1A.0321s0370
Salix purpurea
SapurV1A.0321s0370
N
0.973
TCM_032479
Theobroma cacao
TCM_032479
N
0.906