CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NAP
(
Vitis vinifera
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
VIT_01s0026g02710
T296383_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.948
0.902
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.948
0.902
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.948
0.902
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.948
0.902
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.885
0.759
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_01s0026g02710.t01
NAC/NAM
10
134
PPGFRFHPTDEELIMYYLKNQATSKPCPVSIIPEVDIYKFEPWELPEKAEFGENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYKGRPPKGIKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Vitis vinifera
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_06315
Beauveria bassiana
BBA_06315
I
0.000
ANIA_03769
Aspergillus nidulans
CADANIAG00004949
D
0.000
FGRRES_03226_M
Fusarium graminearum
FGRRES_03226_M
I
0.000
PVAR5_5915
Byssochlamys spectabilis
PVAR5_5915
I
0.000
S40285_07224
Stachybotrys chlorohalonata
S40285_07224
I
0.000
S40288_05556
Stachybotrys chartarum
S40288_05556
I
0.000
TRIATDRAFT_182375
Trichoderma atroviride
TRIATDRAFT_182375
I
0.000
TRIREDRAFT_3605
Trichoderma reesei
TRIREDRAFT_3605
I
0.000
TRIVIDRAFT_124610
Trichoderma virens
TRIVIDRAFT_124610
I
0.000
VHEMI01075
Torrubiella hemipterigena
VHEMI01075
N
0.000