CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_08371
(
Cicer arietinum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ca_08371
T296480_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.917
0.833
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.917
0.833
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_08371
NAC/NAM
32
158
APGFRFHPTDEELVIYYLKRKVCGKHFRFDAISEVDIYKSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSQGYWKATGNDRPVKHDLRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Cicer arietinum
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000004125
Pelodiscus sinensis
ENSPSIG00000004125
N
0.000
SMAR001477
Strigamia maritima
SMAR001477
I
0.000
SMAR010329
Strigamia maritima
SMAR010329
N
0.000
neurog2
Xenopus tropicalis
XB-GENE-491040
N
0.000
neurog2.L
Xenopus laevis
XB-GENE-6077660
I
0.000
neurog2.S
Xenopus laevis
XB-GENE-6252035
N
0.000