CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ca_16946 *(Cicer arietinum)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Ca_16946	T296505_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC002 M00970_2.00	Arabidopsis thaliana	NBACGYAWMN	NKWTRCGTVN	PBM Lindemose et al.(2014) ATAF1	0.945	0.825
NAC002 M07159_2.00	Arabidopsis thaliana	KVCGTRWNNNWHWHKNHHWYND	HNRWDDNMDWDWNNNWYACGBM	Dap-seq OMalley et al.(2016) ATAF1_col_a	0.945	0.825
NAC002 M07160_2.00	Arabidopsis thaliana	YACGY	RCGTR	Dap-seq OMalley et al.(2016) ATAF1_colamp_a	0.945	0.825
NAC48 M11084_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$NAC6_01	0.943	0.833
NAC025 M02368_2.00	Arabidopsis thaliana	YACGYAAY	RTTRCGTR	PBM Weirauch et al.(2014) pTH7656	0.880	0.702
NAC018 M07176_2.00	Arabidopsis thaliana	DYACGBMAYYD	HRRTKVCGTRH	Dap-seq OMalley et al.(2016) NAM_colamp_a	0.873	0.746
NAC018 M07177_2.00	Arabidopsis thaliana	WDNCKWNHNNNWYACGBMA	TKVCGTRWNNNDNWMGNHW	Dap-seq OMalley et al.(2016) NAM_col_v3a	0.873	0.746
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ca_16946	NAC/NAM	8	131	PPGFRFHPTDEELVNHYLCRKCSSQPIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKPLGIKKALVFYAGKAPKGVKTNWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Cicer arietinum* TFs