CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm001404
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm001404
T296618_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm001404
NAC/NAM
5
80
PPGYRFYPTEEELVSFYLLNKLEGKRDDTRRVIPVVDIYSKEPWDLPKFSGELCHGDTEQWFFCTLPASIPTSYSN
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.880
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.929
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.934
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.907
Ca_15160
Cicer arietinum
Ca_15160
N
0.885
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.939
Cla003087
Citrullus lanatus
Cla003087
I
0.875
Cla008777
Citrullus lanatus
Cla008777
N
0.902
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
0.895
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.923
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.882
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.905
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.881
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.889
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.884
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.884
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.891
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.923
F775_19761
Aegilops tauschii
F775_19761
N
0.878
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.928
GLYMA12G09670
Glycine max
GLYMA12G09670
N
0.871
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.907
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.905
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.929
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.912
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.913
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.896
LjSGA_014778.2
Lotus japonicus
LjSGA_014778.2
N
0.883
MDP0000130797
Malus domestica
MDP0000130797
N
0.962
MDP0000205938
Malus domestica
MDP0000205938
N
0.952
MDP0000252435
Malus domestica
MDP0000252435
N
0.886
MDP0000252746
Malus domestica
MDP0000252746
N
0.882
MDP0000506233
Malus domestica
MDP0000506233
N
0.879
MDP0000759504
Malus domestica
MDP0000759504
N
0.962
mgf020234m
Mimulus guttatus
mgf020234m
N
0.913
mgf024293m
Mimulus guttatus
mgf024293m
N
0.897
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
0.877
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.944
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.909
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.922
PK27925.1
Cannabis sativa
PK27925.1
N
0.932
PK29014.1
Cannabis sativa
PK29014.1
N
0.890
Pm001403
Prunus mume
Pm001403
N
0.978
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
0.891
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.891
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.978
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.881
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.878
Si002586m.g
Setaria italica
Si002586m.g
N
0.901
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.929
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.909
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.890
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
0.878