cassava1317.valid.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava1317.valid.m1 T296821_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.947 0.929
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.947 0.929
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.947 0.929
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.947 0.929
Traes_5BL_CC18CAD72
M11085_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC691_01 		0.884 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava1317.valid.m1 NAC/NAM 10 134

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.072940 Cucumis sativus Cucsa.072940 N 0.000
GLYMA12G32280 Glycine max GLYMA12G32280 N 0.000
GLYMA13G38140 Glycine max GLYMA13G38140 N 0.000
GRMZM2G061906 Zea mays GRMZM2G061906 N 0.000