CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava15688.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava15688.m1
T296831_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava15688.m1
NAC/NAM
2
137
APGFRFYPTEEELVSFYLHNKLEGKRDDLNTAIGRVIPVLDIYDFNPWDLPQLSGELCRKDPEQWFFFIPRQKRETQGGRPSRLTTTGYWKSTGSPGYVYSSSNGRYIGAKRTMVFYKGRIPHGRKTEWKMNEYKV
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29883.m001955
Ricinus communis
29883.m001955
I
0.000
29912.m005397
Ricinus communis
29912.m005397
I
0.000
Aquca_039_00029
Aquilegia coerulea
Aquca_039_00029
I
0.000
HSFA1B
Arabidopsis thaliana
AT5G16820
D
0.000
HSFA6A
Arabidopsis thaliana
AT5G43840
D
0.000
Bo00967s020
Brassica oleracea
Bo00967s020
I
0.000
Bo2g161830
Brassica oleracea
Bo2g161830
I
0.000
Bo9g151630
Brassica oleracea
Bo9g151630
I
0.000
Bo9g161770
Brassica oleracea
Bo9g161770
I
0.000
Bostr.2618s0023
Boechera stricta
Bostr.2618s0023
I
0.000
Bostr.26833s0037
Boechera stricta
Bostr.26833s0037
I
0.000
Bostr.3148s0085
Boechera stricta
Bostr.3148s0085
I
0.000
Bra008593
Brassica rapa
Bra008593
I
0.000
Bra023584
Brassica rapa
Bra023584
I
0.000
Bra029291
Brassica rapa
Bra029291
I
0.000
Bra029292
Brassica rapa
Bra029292
I
0.000
BRADI1G55630
Brachypodium distachyon
BRADI1G55630
I
0.000
Cagra.0434s0049
Capsella grandiflora
Cagra.0434s0049
I
0.000
Cagra.4553s0008
Capsella grandiflora
Cagra.4553s0008
I
0.000
Carubv10003259m.g
Capsella rubella
Carubv10003259m.g
I
0.000
Carubv10026734m.g
Capsella rubella
Carubv10026734m.g
I
0.000
cassava35573.valid.m1
Manihot esculenta
cassava35573.valid.m1
I
0.000
cassava721.valid.m1
Manihot esculenta
cassava721.valid.m1
I
0.000
Ca_03183
Cicer arietinum
Ca_03183
I
0.000
Ca_07800
Cicer arietinum
Ca_07800
I
0.000
chr4.CM0297.80.nd
Lotus japonicus
chr4.CM0297.80.nd
I
0.000
chr5.CM0024.490.nc
Lotus japonicus
chr5.CM0024.490.nc
I
0.000
Ciclev10008617m.g
Citrus clementina
Ciclev10008617m.g
I
0.000
Ciclev10020718m.g
Citrus clementina
Ciclev10020718m.g
I
0.000
Cla017103
Citrullus lanatus
Cla017103
I
0.000
Contig10067.0.g63
Oxytricha trifallax
Contig10067.0.g63
I
0.000
Contig10723.0.g13
Oxytricha trifallax
Contig10723.0.g13
I
0.000
Cucsa.117100
Cucumis sativus
Cucsa.117100
I
0.000
Cucsa.212820
Cucumis sativus
Cucsa.212820
I
0.000
Eucgr.C00873
Eucalyptus grandis
Eucgr.C00873
I
0.000
Eucgr.C03433
Eucalyptus grandis
Eucgr.C03433
I
0.000
Eucgr.C03452
Eucalyptus grandis
Eucgr.C03452
I
0.000
evm.TU.supercontig_50.58
Carica papaya
evm.TU.supercontig_50.58
I
0.000
AT-HSFA6A
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8000489
I
0.000
HSF3
Arabidopsis lyrata
fgenesh2_kg.6__1675__AT5G16820.1
I
0.000
HSF1
Arabidopsis lyrata
fgenesh2_kg.7__2533__AT4G17750.1
I
0.000
gene20347-v1.0-hybrid
Fragaria vesca
gene20347-v1.0-hybrid
I
0.000
GLOINDRAFT_240353
Rhizophagus irregularis
GLOINDRAFT_240353
I
0.000
GLYMA04G05500
Glycine max
GLYMA04G05500
I
0.000
GLYMA13G16510
Glycine max
GLYMA13G16510
I
0.000
GLYMA15G09280
Glycine max
GLYMA15G09280
I
0.000
GLYMA17G06160
Glycine max
GLYMA17G06160
I
0.000
Gorai.004G076900
Gossypium raimondii
Gorai.004G076900
I
0.000
Gorai.007G139600
Gossypium raimondii
Gorai.007G139600
I
0.000
GSMUA_Achr3G15640_001
Musa acuminata
GSMUA_Achr3G15640_001
I
0.000
GSMUA_Achr8G20520_001
Musa acuminata
GSMUA_Achr8G20520_001
I
0.000
Lus10000492.g
Linum usitatissimum
Lus10000492.g
I
0.000
Lus10011941.g
Linum usitatissimum
Lus10011941.g
I
0.000
Lus10014698.g
Linum usitatissimum
Lus10014698.g
I
0.000
Lus10027627.g
Linum usitatissimum
Lus10027627.g
I
0.000
MDP0000301101
Malus domestica
MDP0000301101
I
0.000
MDP0000456290
Malus domestica
MDP0000456290
I
0.000
MDP0000746803
Malus domestica
MDP0000746803
I
0.000
MTR_1g071360
Medicago truncatula
MTR_1g071360
I
0.000
orange1.1g016091m.g
Citrus sinensis
orange1.1g016091m.g
I
0.000
orange1.1g017694m.g
Citrus sinensis
orange1.1g017694m.g
I
0.000
PDK_20s1342122g001
Phoenix dactylifera
PDK_20s1342122g001
I
0.000
Pm011227
Prunus mume
Pm011227
I
0.000
Pm020253
Prunus mume
Pm020253
I
0.000
Pm027197
Prunus mume
Pm027197
I
0.000
POPTR_0014s13780
Populus trichocarpa
POPTR_0014s13780
I
0.000
PRUPE_ppa004559mg
Prunus persica
PRUPE_ppa004559mg
I
0.000
PRUPE_ppa010224mg
Prunus persica
PRUPE_ppa010224mg
I
0.000
PRUPE_ppa016533mg
Prunus persica
PRUPE_ppa016533mg
I
0.000
Solyc07g055710.2
Solanum lycopersicum
Solyc07g055710.2
I
0.000
TCM_004275
Theobroma cacao
TCM_004275
I
0.000
TCM_025482
Theobroma cacao
TCM_025482
I
0.000
TCM_037635
Theobroma cacao
TCM_037635
I
0.000
Thhalv10013428m.g
Eutrema salsugineum
Thhalv10013428m.g
I
0.000
VIT_02s0012g01810
Vitis vinifera
VIT_02s0012g01810
I
0.000
VIT_11s0016g02010
Vitis vinifera
VIT_11s0016g02010
I
0.000