CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava30278.valid.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava30278.valid.m1
T296881_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW
WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.969
0.947
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.957
0.895
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.957
0.895
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH
DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.943
0.763
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD
HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.943
0.763
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA
TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.940
0.807
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.937
0.798
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.937
0.798
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.936
0.825
anac071
M07219_2.00
Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_col_a
0.880
0.693
anac071
M07220_2.00
Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a
0.880
0.693
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava30278.valid.m1
NAC/NAM
7
133
PPGFRFHPTDEELVAYYLKRKINGHKIELEIIPEVDLYKCEPWDLPGKSLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNSHTRPVGMKKTLVYYRGRAPHGARTGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG003455.1
Alligator sinensis
Alligator_sinensis_CCG003455.1
I
Cmyd_10007335
Chelonia mydas
Cmyd_10007335
I
ENSAMEG00000006419
Ailuropoda melanoleuca
ENSAMEG00000006419
I
ENSAMXG00000001207
Astyanax mexicanus
ENSAMXG00000001207
I
ZBTB3
Bos taurus
ENSBTAG00000021329
I
ENSBTAP00000051139-D1
Bos grunniens
ENSBTAP00000051139-D1
I
ZBTB3
Canis familiaris
ENSCAFG00000015650
I
ZBTB3
Choloepus hoffmanni
ENSCHOG00000012845
I
ZBTB3
Callithrix jacchus
ENSCJAG00000018693
I
ZBTB3
Cavia porcellus
ENSCPOG00000011665
I
ENSCSAG00000006712
Chlorocebus sabaeus
ENSCSAG00000006712
I
zbtb3
Danio rerio
ENSDARG00000036235
I
ENSDNOG00000006546
Dasypus novemcinctus
ENSDNOG00000006546
I
Zbtb3
Dipodomys ordii
ENSDORG00000015697
I
ZBTB3
Felis catus
ENSFCAG00000027690
I
ZBTB3
Homo sapiens
ENSG00000185670
I
zbtb3
Gasterosteus aculeatus
ENSGACG00000016930
I
ZBTB3
Gorilla gorilla
ENSGGOG00000011735
I
ENSLACG00000006879
Latimeria chalumnae
ENSLACG00000006879
I
ENSLOCG00000001327
Lepisosteus oculatus
ENSLOCG00000001327
I
ENSMEUG00000015659
Macropus eugenii
ENSMEUG00000015659
I
ZBTB3
Microcebus murinus
ENSMICG00000009961
I
ZBTB3
Myotis lucifugus
ENSMLUG00000011020
I
ENSMMUG00000014369
Macaca mulatta
ENSMMUG00000014369
I
ENSMODG00000007952
Monodelphis domestica
ENSMODG00000007952
I
ENSMPUG00000013694
Mustela putorius furo
ENSMPUG00000013694
I
Zbtb3
Mus musculus
ENSMUSG00000071661
D
ENSNLEG00000004096
Nomascus leucogenys
ENSNLEG00000004096
I
ENSOANG00000001309
Ornithorhynchus anatinus
ENSOANG00000001309
I
ENSOARG00000016929
Ovis aries
ENSOARG00000016929
I
ZBTB3
Oryctolagus cuniculus
ENSOCUG00000008921
I
ZBTB3
Otolemur garnettii
ENSOGAG00000011414
I
ENSONIG00000005336
Oreochromis niloticus
ENSONIG00000005336
I
ENSP00000378286
Macaca fascicularis
ENSP00000378286
I
ENSPANG00000008469
Papio anubis
ENSPANG00000008469
I
ENSPFOG00000009453
Poecilia formosa
ENSPFOG00000009453
I
ENSPPYG00000003148
Pongo abelii
ENSPPYG00000003148
I
ENSPSIG00000001786
Pelodiscus sinensis
ENSPSIG00000001786
I
ZBTB3
Pan troglodytes
ENSPTRG00000003785
I
ZBTB3
Pteropus vampyrus
ENSPVAG00000003477
I
Zbtb3
Rattus norvegicus
ENSRNOG00000019461
I
ENSSSCG00000025351
Sus scrofa
ENSSSCG00000025351
I
ENSSTOG00000027839
Ictidomys tridecemlineatus
ENSSTOG00000027839
I
zbtb3
Tetraodon nigroviridis
ENSTNIG00000003382
I
zbtb3
Takifugu rubripes
ENSTRUG00000013773
I
ZBTB3
Tursiops truncatus
ENSTTRG00000002477
I
ENSXMAG00000003145
Xiphophorus maculatus
ENSXMAG00000003145
I
Ogr03307
Ophisaurus gracilis
Ogr03307
I
Pvit_09391
Pogona vitticeps
Pvit_09391
I
zbtb3
Xenopus tropicalis
XB-GENE-991962
I