CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf016848m
(
Mimulus guttatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
mgf016848m
T297096_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.911
0.848
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.911
0.848
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.911
0.848
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.911
0.848
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf016848m
NAC/NAM
12
136
PPGFRFHPTDEELIVYYLRNQASSNPCPVSVIHEIDIYKFDPWELPEKAEVGEKEWYFFSPRDRKYPNGARPNRAAVSGYWKATGTDKGIYSGSKYVGVKKSLVFYKGKPPKGIKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Mimulus guttatus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_10639
Exophiala aquamarina
A1O9_10639
N
G647_05698
Cladophialophora carrionii
G647_05698
N
HMPREF1541_00717
Cyphellophora europaea
HMPREF1541_00717
N
PMAA_065570
Talaromyces marneffei
PMAA_065570
I
PMAA_065570
Penicillium marneffei
PMAA_065570
I
PV05_06943
Exophiala xenobiotica
PV05_06943
N
PV06_07948
Exophiala oligosperma
PV06_07948
N
TSTA_085600
Talaromyces stipitatus
TSTA_085600
I
Z517_04648
Fonsecaea pedrosoi
Z517_04648
N
Z518_02054
Rhinocladiella mackenziei
Z518_02054
N