Cagra.0887s0008 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.0887s0008 T297369_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.969 1.000
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.969 1.000
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.969 1.000
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.969 1.000
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0887s0008.1.p NAC/NAM 10 134

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004572 Aedes aegypti AAEL004572 N 0.000
AARA006416 Anopheles arabiensis AARA006416 N 0.000
AATE004455 Anopheles atroparvus AATE004455 N 0.000
ACHR002542 Anopheles christyi ACHR002542 N 0.000
ACOM029624 Anopheles coluzzii ACOM029624 N 0.000
ACUA022751 Anopheles culicifacies ACUA022751 N 0.000
ACYPI002959 Acyrthosiphon pisum ACYPI002959 N 0.000
ADIR006726 Anopheles dirus ADIR006726 N 0.000
AEPI008759 Anopheles epiroticus AEPI008759 N 0.000
AFAF006670 Anopheles farauti AFAF006670 N 0.000
AFUN004467 Anopheles funestus AFUN004467 N 0.000
AGAP004494 Anopheles gambiae AGAP004494 N 0.000
AMEM016490 Anopheles merus AMEM016490 N 0.000
AMIN004869 Anopheles minimus AMIN004869 N 0.000
AQUA009670 Anopheles quadriannulatus AQUA009670 N 0.000
BGIBMGA010815 Bombyx mori BGIBMGA010815 N 0.000
Cflo_05310--NP_001011629.1_APIME Camponotus floridanus Cflo_05310--NP_001011629.1_APIME N 0.000
CLEC012958 Cimex lectularius CLEC012958 N 0.000
CPIJ012997 Culex quinquefasciatus CPIJ012997 N 0.000
CpipJ_CPIJ012997 Culex pipiens CpipJ_CPIJ012997 N 0.000
GB50048 Apis mellifera GB50048 N 0.000
HHAL003515-PA Halyomorpha halys HHAL003515-PA N 0.000
KGM_00875 Danaus plexippus KGM_00875 N 0.000
L798_02049 Zootermopsis nevadensis L798_02049 N 0.000
LDEC001996 Leptinotarsa decemlineata LDEC001996 N 0.000
PHUM461050 Pediculus humanus PHUM461050 N 0.000
PPAI001250 Phlebotomus papatasi PPAI001250 N 0.000
RPRC010858 Rhodnius prolixus RPRC010858 N 0.000
SMAR000814 Strigamia maritima SMAR000814 N 0.000
TC012464 Tribolium castaneum TC012464 N 0.000
YQE_12847 Dendroctonus ponderosae YQE_12847 N 0.000