CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1914s0015
(
Capsella grandiflora
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cagra.1914s0015
T297402_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1914s0015.1.p
NAC/NAM
1
136
MRFRPSDLEMAVYFLLKKVLGHHMKARTVPQECHDIFSTHPRDFPDNDQEEDEHWYFYCLKTKNKFATKSYNLWIPTGEETEVLDPKKNDELVGIKRSFAFIENEDEEEEKSENNSLPDEEEEPPRYNWFLDEISL
Links
Other
NAC/NAM
family TFs
Other
Capsella grandiflora
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
anac095
Arabidopsis lyrata
Al_scaffold_0007_3541
N
0.994
AT3G56520
Arabidopsis thaliana
AT3G56520
N
0.945
anac095
Arabidopsis thaliana
AT5G41090
N
0.991
Bo6g064960
Brassica oleracea
Bo6g064960
N
0.938
Bo6g072200
Brassica oleracea
Bo6g072200
N
0.881
Bo8g090950
Brassica oleracea
Bo8g090950
N
0.914
Bostr.20505s0102
Boechera stricta
Bostr.20505s0102
N
0.964
Bostr.7200s0128
Boechera stricta
Bostr.7200s0128
N
0.993
Bra007254
Brassica rapa
Bra007254
N
0.897
Bra028486
Brassica rapa
Bra028486
N
0.940
Carubv10005574m.g
Capsella rubella
Carubv10005574m.g
N
0.999
fgenesh1_pm.C_scaffold_5001708
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001708
N
0.971
scaffold_500654.1
Arabidopsis lyrata
scaffold_500654.1
N
0.944
Thhalv10006451m.g
Eutrema salsugineum
Thhalv10006451m.g
N
0.963
Thhalv10027901m.g
Eutrema salsugineum
Thhalv10027901m.g
N
0.956