Cagra.9217s0021 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.9217s0021 T297448_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.963 0.991
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.963 0.991
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.963 0.991
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.963 0.991
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.956 0.956
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.956 0.956
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.956 0.956
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.9217s0021.1.p NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019356 Ailuropoda melanoleuca ENSAMEG00000019356 I 0.000
ZNF22 Canis familiaris ENSCAFG00000028867 I 0.000
ZNF22 Callithrix jacchus ENSCJAG00000022497 I 0.000
ENSCPOG00000001992 Cavia porcellus ENSCPOG00000001992 I 0.000
ENSCSAG00000018417 Chlorocebus sabaeus ENSCSAG00000018417 I 0.000
ZNF22 Dasypus novemcinctus ENSDNOG00000015002 I 0.000
Zfp422 Dipodomys ordii ENSDORG00000005689 I 0.000
ZNF22 Equus caballus ENSECAG00000003034 I 0.000
ZNF22 Erinaceus europaeus ENSEEUG00000012611 I 0.000
ZNF22 Echinops telfairi ENSETEG00000007863 I 0.000
ZNF22 Felis catus ENSFCAG00000003490 I 0.000
ZNF22 Homo sapiens ENSG00000165512 D 0.000
ZNF22 Gorilla gorilla ENSGGOG00000007097 I 0.000
ZNF22 Loxodonta africana ENSLAFG00000000878 I 0.000
ZNF22 Myotis lucifugus ENSMLUG00000006347 I 0.000
ZNF22 Macaca mulatta ENSMMUG00000017492 I 0.000
ZNF22 Monodelphis domestica ENSMODG00000010011 I 0.000
Zfp422 Mus musculus ENSMUSG00000059878 I 0.000
ENSNLEG00000015956 Nomascus leucogenys ENSNLEG00000015956 I 0.000
ENSOARG00000003699 Ovis aries ENSOARG00000003699 I 0.000
ZNF22 Oryctolagus cuniculus ENSOCUG00000001382 I 0.000
ZNF22 Otolemur garnettii ENSOGAG00000002365 I 0.000
ENSP00000298299 Macaca fascicularis ENSP00000298299 I 0.000
ENSP00000298299-D2 Bos grunniens ENSP00000298299-D2 I 0.000
ZNF22 Procavia capensis ENSPCAG00000011827 I 0.000
ENSPPYG00000002226 Pongo abelii ENSPPYG00000002226 I 0.000
ZNF22 Pan troglodytes ENSPTRG00000002455 I 0.000
ZNF22 Pteropus vampyrus ENSPVAG00000014727 I 0.000
Zfp422 Rattus norvegicus ENSRNOG00000013379 I 0.000
ENSSSCG00000023223 Sus scrofa ENSSSCG00000023223 I 0.000
ENSSTOG00000012374 Ictidomys tridecemlineatus ENSSTOG00000012374 I 0.000
ZNF22 Tupaia belangeri ENSTBEG00000005332 I 0.000
ENSTSYG00000001773 Tarsius syrichta ENSTSYG00000001773 I 0.000
ZNF22 Tursiops truncatus ENSTTRG00000011729 I 0.000
Myotis_brandtii_ZNF22_10006734 Myotis brandtii Myotis_brandtii_ZNF22_10006734 I 0.000