Carubv10009727m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10009727m.g T297491_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC005
M07163_2.00 		Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW
WWACTTRNDDNRBAAGNWW		 Dap-seq
OMalley et al.(2016)
ANAC005_col_a 		0.885 0.667
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.882 0.586
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.882 0.586
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009727m NAC/NAM 9 138

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01018 Capronia coronata A1O1_01018 N
A1O3_07536 Capronia epimyces A1O3_07536 N
A1O5_04201 Cladophialophora psammophila A1O5_04201 N
A1O7_00075 Cladophialophora yegresii A1O7_00075 N
A1O9_05872 Exophiala aquamarina A1O9_05872 N
CGGC5_4513 Colletotrichum gloeosporioides CGGC5_4513 N
CH063_15788 Colletotrichum higginsianum CH063_15788 N
CHGG_05804 Chaetomium globosum CHGG_05804 N
Cob_06597 Colletotrichum orbiculare Cob_06597 N
CTHT_0025430 Chaetomium thermophilum CTHT_0025430 N
FOXG_02222 Fusarium oxysporum FOXG_02222 N
G647_00085 Cladophialophora carrionii G647_00085 N
HMPREF1120_00699 Exophiala dermatitidis HMPREF1120_00699 N
HMPREF1541_07769 Cyphellophora europaea HMPREF1541_07769 N
MYCTH_81165 Myceliophthora thermophila MYCTH_81165 N
PV06_03637 Exophiala oligosperma PV06_03637 N
PV08_06048 Exophiala spinifera PV08_06048 N
PV11_07820 Exophiala sideris PV11_07820 N
PVAR5_3049 Byssochlamys spectabilis PVAR5_3049 N
THITE_2119700 Thielavia terrestris THITE_2119700 N