Carubv10013370m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10013370m.g T297503_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.964 0.965
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.964 0.965
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.964 0.965
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.958 0.930
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.958 0.930
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.958 0.930
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.958 0.930
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10013370m NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_36555 Baudoinia compniacensis BAUCODRAFT_36555 N 0.000
ACLA_062510 Aspergillus clavatus CADACLAG00005983 N 0.000
CADAFLAG00002407 Aspergillus flavus CADAFLAG00002407 N 0.000
AFUA_3G01980 Aspergillus fumigatus CADAFUAG00000223 N 0.000
AFUA_3G12180 Aspergillus fumigatus CADAFUAG00005119 N 0.000
CADANGAG00005038 Aspergillus niger CADANGAG00005038 N 0.000
CADANGAG00011548 Aspergillus niger CADANGAG00011548 N 0.000
ANIA_00718 Aspergillus nidulans CADANIAG00001950 N 0.000
ANIA_05052 Aspergillus nidulans CADANIAG00005337 N 0.000
NFIA_003050 Neosartorya fischeri CADNFIAG00000049 N 0.000
DOTSEDRAFT_131743 Dothistroma septosporum DOTSEDRAFT_131743 N 0.000
DOTSEDRAFT_147401 Dothistroma septosporum DOTSEDRAFT_147401 N 0.000
e_gw1.00866.217.1 Aspergillus carbonarius e_gw1.00866.217.1 N 0.000
fgenesh1_pm.00083_#_41 Aspergillus carbonarius fgenesh1_pm.00083_#_41 N 0.000
MYCFIDRAFT_203102 Pseudocercospora fijiensis MYCFIDRAFT_203102 N 0.000
Mycgr3G21552 Zymoseptoria tritici Mycgr3G21552 N 0.000
Pc21g12360 Penicillium chrysogenum Pc21g12360 N 0.000
Pc21g23810 Penicillium chrysogenum Pc21g23810 N 0.000
PCH_Pc21g12360 Penicillium rubens PCH_Pc21g12360 N 0.000
PCH_Pc21g23810 Penicillium rubens PCH_Pc21g23810 N 0.000
PEX1_039490 Penicillium expansum PEX1_039490 N 0.000
PV09_04380 Verruconis gallopava PV09_04380 N 0.000
SEPMUDRAFT_148614 Sphaerulina musiva SEPMUDRAFT_148614 N 0.000
TRIATDRAFT_283211 Trichoderma atroviride TRIATDRAFT_283211 N 0.000
TRIVIDRAFT_134559 Trichoderma virens TRIVIDRAFT_134559 N 0.000
TSTA_019630 Talaromyces stipitatus TSTA_019630 N 0.000
TSTA_096880 Talaromyces stipitatus TSTA_096880 N 0.000
U727_0043182001 Penicillium solitum U727_0043182001 N 0.000