Gorai.009G260000 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.009G260000 T298141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC13
M07170_2.00 		Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA		 Dap-seq
OMalley et al.(2016)
ANAC013_col_a 		0.880 0.734
ANAC13
M07171_2.00 		Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG		 Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a 		0.880 0.734
ANAC13
M11077_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC013_Q2 		0.880 0.734
anac028
M01289_2.00 		Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN		 PBM
Lambert et al.(2019)
pTH9962 		0.876 0.679
anac028
M07179_2.00 		Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC028_col_a 		0.876 0.679
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G260000.1 NAC/NAM 21 147
Gorai.009G260000.2 NAC/NAM 21 147
Gorai.009G260000.3 NAC/NAM 21 147
Gorai.009G260000.4 NAC/NAM 21 147

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EmuJ_000280300 Echinococcus multilocularis EmuJ_000280300 N
EmuJ_000280500 Echinococcus multilocularis EmuJ_000280500 N
ENSAMEG00000004960 Ailuropoda melanoleuca ENSAMEG00000004960 I
ENSBTAP00000049813-D1 Bos grunniens ENSBTAP00000049813-D1 I
DUXA Canis familiaris ENSCAFG00000002431 I
ENSCJAG00000023408 Callithrix jacchus ENSCJAG00000023408 I
ENSCSAG00000001657 Chlorocebus sabaeus ENSCSAG00000001657 I
ENSCSAG00000019478 Chlorocebus sabaeus ENSCSAG00000019478 I
ENSDNOG00000033746 Dasypus novemcinctus ENSDNOG00000033746 I
ENSDNOG00000041460 Dasypus novemcinctus ENSDNOG00000041460 I
DUXA Equus caballus ENSECAG00000021112 I
DUXA Felis catus ENSFCAG00000007545 I
DUXA Homo sapiens ENSG00000258873 D
DUX4 Homo sapiens ENSG00000260596 D
DUXA Gorilla gorilla ENSGGOG00000005650 I
ENSGGOG00000023520 Gorilla gorilla ENSGGOG00000023520 I
DUXA Microcebus murinus ENSMICG00000006042 I
ENSMICG00000006881 Microcebus murinus ENSMICG00000006881 I
DUXA Macaca mulatta ENSMMUG00000007788 I
ENSMMUG00000014712 Macaca mulatta ENSMMUG00000014712 I
ENSMMUG00000016525 Macaca mulatta ENSMMUG00000016525 I
ENSMMUG00000017616 Macaca mulatta ENSMMUG00000017616 I
ENSMMUP00000010232 Macaca fascicularis ENSMMUP00000010232 I
ENSMMUP00000019302 Macaca fascicularis ENSMMUP00000019302 I
ENSNLEG00000016146 Nomascus leucogenys ENSNLEG00000016146 I
ENSOARG00000003446 Ovis aries ENSOARG00000003446 I
DUXA Oryctolagus cuniculus ENSOCUG00000011331 I
ENSPANG00000009357 Papio anubis ENSPANG00000009357 I
ENSPPYG00000010457 Pongo abelii ENSPPYG00000010457 I
ENSPPYG00000015280 Pongo abelii ENSPPYG00000015280 I
DUXA Pan troglodytes ENSPTRG00000028871 I
DUXA Tursiops truncatus ENSTTRG00000014200 I
NEMVEDRAFT_v1g38792 Nematostella vectensis NEMVEDRAFT_v1g38792 I
NEMVEDRAFT_v1g92436 Nematostella vectensis NEMVEDRAFT_v1g92436 I
NEMVEDRAFT_v1g92500 Nematostella vectensis NEMVEDRAFT_v1g92500 I