CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G142400
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.010G142400
T298154_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.948
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G142400.1
NAC/NAM
37
162
MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGENSRSIGLKKTLVFYSGKAPKGIRSSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_01518
Aspergillus nidulans
CADANIAG00008146
D
CFIO01_08941
Colletotrichum fioriniae
CFIO01_08941
N
CGGC5_834
Colletotrichum gloeosporioides
CGGC5_834
N
CH063_07902
Colletotrichum higginsianum
CH063_07902
N
Cob_04241
Colletotrichum orbiculare
Cob_04241
N
e_gw1.6.920.1
Nectria haematococca
e_gw1.6.920.1
I
FGRRES_07198
Fusarium graminearum
FGRRES_07198
D
FOXG_01595
Fusarium oxysporum
FOXG_01595
I
FPSE_03183
Fusarium pseudograminearum
FPSE_03183
I
FVEG_07955
Fusarium verticillioides
FVEG_07955
I
GLRG_04974
Colletotrichum graminicola
GLRG_04974
I
HMPREF1120_07579
Exophiala dermatitidis
HMPREF1120_07579
I
NechaG49195
Fusarium solani
NechaG49195
I
OIDMADRAFT_130335
Oidiodendron maius
OIDMADRAFT_130335
N
PFICI_11013
Pestalotiopsis fici
PFICI_11013
N
PV04_09950
Capronia semiimmersa
PV04_09950
I
S40285_05512
Stachybotrys chlorohalonata
S40285_05512
I
SBOR_7563
Sclerotinia borealis
SBOR_7563
N
TRIATDRAFT_233204
Trichoderma atroviride
TRIATDRAFT_233204
I
TRIREDRAFT_53877
Trichoderma reesei
TRIREDRAFT_53877
I
TRIVIDRAFT_188169
Trichoderma virens
TRIVIDRAFT_188169
I