CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10015389.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10015389.g
T298256_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.903
0.628
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.903
0.628
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.903
0.628
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.887
0.602
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10015389
NAC/NAM
7
145
PPGFRFHPTDQELLIYYLKQKITSSSSSSPPSLDNCSEQVSLIADINIYKFDPWDLPSMAMFGENEWFFFSPRDRKYPNGARPNRTAASGYWKATGTDKPILSTNGTSHCLGVKKALVFYQGKPPKGIKTNWMMLEYRL
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R006263
Aptenodytes forsteri
Afo_R006263
N
0.000
Alligator_sinensis_CCG011535.1
Alligator sinensis
Alligator_sinensis_CCG011535.1
N
0.000
ENSAMEG00000012706
Ailuropoda melanoleuca
ENSAMEG00000012706
N
0.000
ENSAPLG00000008722
Anas platyrhynchos
ENSAPLG00000008722
N
0.000
AEBP2
Bos taurus
ENSBTAG00000010818
N
0.000
AEBP2
Canis familiaris
ENSCAFG00000012441
N
0.000
ENSCJAG00000001342
Callithrix jacchus
ENSCJAG00000001342
N
0.000
AEBP2
Cavia porcellus
ENSCPOG00000007440
N
0.000
ENSCSAG00000008085
Chlorocebus sabaeus
ENSCSAG00000008085
N
0.000
AEBP2
Dasypus novemcinctus
ENSDNOG00000014519
N
0.000
AEBP2
Equus caballus
ENSECAG00000012977
N
0.000
ENSETEG00000006095
Echinops telfairi
ENSETEG00000006095
N
0.000
ENSFALG00000001055
Ficedula albicollis
ENSFALG00000001055
N
0.000
AEBP2
Felis catus
ENSFCAG00000031640
N
0.000
AEBP2
Homo sapiens
ENSG00000139154
N
0.000
aebp2
Gasterosteus aculeatus
ENSGACG00000019249
N
0.000
ENSGALG00000013136
Gallus gallus
ENSGALG00000013136
N
0.000
AEBP2
Gorilla gorilla
ENSGGOG00000002023
N
0.000
ENSLACG00000010628
Latimeria chalumnae
ENSLACG00000010628
N
0.000
AEBP2
Loxodonta africana
ENSLAFG00000020685
N
0.000
ENSLOCG00000015421
Lepisosteus oculatus
ENSLOCG00000015421
N
0.000
ENSMEUG00000010574
Macropus eugenii
ENSMEUG00000010574
N
0.000
ENSMGAG00000013591
Meleagris gallopavo
ENSMGAG00000013591
N
0.000
AEBP2
Myotis lucifugus
ENSMLUG00000006293
N
0.000
AEBP2
Macaca mulatta
ENSMMUG00000016243
N
0.000
ENSMODG00000017867
Monodelphis domestica
ENSMODG00000017867
N
0.000
ENSMPUG00000011420
Mustela putorius furo
ENSMPUG00000011420
N
0.000
Aebp2
Mus musculus
ENSMUSG00000030232
N
0.000
ENSNLEG00000004553
Nomascus leucogenys
ENSNLEG00000004553
N
0.000
ENSOARG00000020470
Ovis aries
ENSOARG00000020470
N
0.000
ENSOCUG00000016677
Oryctolagus cuniculus
ENSOCUG00000016677
N
0.000
AEBP2
Otolemur garnettii
ENSOGAG00000017202
N
0.000
AEBP2
Ochotona princeps
ENSOPRG00000014454
N
0.000
ENSP00000381840
Macaca fascicularis
ENSP00000381840
N
0.000
ENSP00000381840-D1
Bos grunniens
ENSP00000381840-D1
N
0.000
ENSPANG00000010276
Papio anubis
ENSPANG00000010276
N
0.000
ENSPPYG00000004345
Pongo abelii
ENSPPYG00000004345
N
0.000
ENSPSIG00000002184
Pelodiscus sinensis
ENSPSIG00000002184
N
0.000
AEBP2
Pan troglodytes
ENSPTRG00000004747
N
0.000
AEBP2
Pteropus vampyrus
ENSPVAG00000008104
N
0.000
Aebp2
Rattus norvegicus
ENSRNOG00000008929
N
0.000
ENSSARG00000010983
Sorex araneus
ENSSARG00000010983
N
0.000
ENSSHAG00000018345
Sarcophilus harrisii
ENSSHAG00000018345
N
0.000
AEBP2
Sus scrofa
ENSSSCG00000000587
N
0.000
AEBP2
Taeniopygia guttata
ENSTGUG00000012348
N
0.000
AEBP2
Tursiops truncatus
ENSTTRG00000011776
N
0.000
ENSVPAG00000008562
Vicugna pacos
ENSVPAG00000008562
N
0.000
Gfo_R002231
Geospiza fortis
Gfo_R002231
N
0.000
Myotis_brandtii_PLEKHA5_10031422
Myotis brandtii
Myotis_brandtii_PLEKHA5_10031422
N
0.000
Tal_R009212
Tyto alba
Tal_R009212
N
0.000
aebp2.L
Xenopus laevis
XB-GENE-6251879
N
0.000