CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Bb00848
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Bb00848
T298776_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb00848.1.p
NAC/NAM
13
145
PACLVFAPEDEVAVEYYLIPRLLGWPPQMDGLILEDDPLSAPPWELLERNGRKDEAFFLAEGQARCGKGTRQKRTCAGGGWWEGQKTCAEGNKLRFPGGGGDKEVAWHKKALNFHGGGGEKGSTGWVMHEYAV
Pavir.Bb00848.1.p
NAC/NAM
183
311
PPGYLFAPEDGDVVENYLLRRILGQPLPLDGLILDDDPLSAPPWELLARNGCRDDAFFFTLGQARSGKGSRQRRTCAGGGFWNGERNCADGEKLRVPGGAEVARRKKALSFQEGGEKASTGWVMHEYAI
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG14050
Drosophila melanogaster
FBgn0040392
N
GG12623
Drosophila erecta
FBgn0104911
N
GH24249
Drosophila grimshawi
FBgn0131705
N
GI21444
Drosophila mojavensis
FBgn0144174
N
GM18889
Drosophila sechellia
FBgn0173792
N
GD16371
Drosophila simulans
FBgn0187991
N
GE16953
Drosophila yakuba
FBgn0234441
N