CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb01144
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Bb01144
T298777_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb01144.1.p
NAC/NAM
13
143
PPTFRFRPTQRELIEFYLLPRARGQDPFPGVIIEDDAAGSSLPWDLFARHGLGSEDEAYFLARTGEARKPGARQDRGCDGGVGAWKMQSSADKDLRVGGERILCRRSNLSLHMGKGKSGGSVGWVMHEYTI
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011179
Oryza indica
BGIOSGA011179
N
Bostr.19427s0042
Boechera stricta
Bostr.19427s0042
I
F775_01009
Aegilops tauschii
F775_01009
N
F775_02805
Aegilops tauschii
F775_02805
N
F775_04526
Aegilops tauschii
F775_04526
N
LPERR03G08340
Leersia perrieri
LPERR03G08340
N
MLOC_56065
Hordeum vulgare
MLOC_56065
N
OB03G19470
Oryza brachyantha
OB03G19470
N
OBART03G09330
Oryza barthii
OBART03G09330
N
OGLUM03G09410
Oryza glumaepatula
OGLUM03G09410
N
OMERI03G08710
Oryza meridionalis
OMERI03G08710
N
ONIVA02G39270
Oryza nivara
ONIVA02G39270
N
OPUNC03G08950
Oryza punctata
OPUNC03G08950
N
ORUFI03G09460
Oryza rufipogon
ORUFI03G09460
N
OS03G0229100
Oryza sativa
OS03G0229100
N
Pavir.Ha01098
Panicum virgatum
Pavir.Ha01098
N
Pavir.Hb01590
Panicum virgatum
Pavir.Hb01590
N
Traes_4BL_2F534B325
Triticum aestivum
Traes_4BL_2F534B325
N
Traes_4DL_F822F371E
Triticum aestivum
Traes_4DL_F822F371E
N