Pavir.Bb02033 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Bb02033 T298779_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC087
M07232_2.00 		Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA		 Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a 		0.906 0.728
ANAC087
M07233_2.00 		Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a 		0.906 0.728
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.877 0.737
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb02033.1.p NAC/NAM 19 149

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07362 Capronia coronata A1O1_07362 N
A1O3_04573 Capronia epimyces A1O3_04573 N
A1O7_02935 Cladophialophora yegresii A1O7_02935 N
A1O9_03021 Exophiala aquamarina A1O9_03021 N
G647_05460 Cladophialophora carrionii G647_05460 N
HMPREF1120_05066 Exophiala dermatitidis HMPREF1120_05066 N
PV04_03101 Capronia semiimmersa PV04_03101 N
PV06_05734 Exophiala oligosperma PV06_05734 N
PV07_07196 Cladophialophora immunda PV07_07196 N
PV08_01251 Exophiala spinifera PV08_01251 N
PV10_06078 Exophiala mesophila PV10_06078 N
Z517_10841 Fonsecaea pedrosoi Z517_10841 N
Z518_00962 Rhinocladiella mackenziei Z518_00962 N
Z519_02775 Cladophialophora bantiana Z519_02775 N