Pavir.Bb03737 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Bb03737 T298786_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.902 0.739
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.902 0.739
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03737.1.p NAC/NAM 12 138

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29851.m002359 Ricinus communis 29851.m002359 I 0.871
30078.m002348 Ricinus communis 30078.m002348 I 0.883
AMTR_s00007p00063550 Amborella trichopoda AMTR_s00007p00063550 N 0.872
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.907
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.874
NAC018 Arabidopsis thaliana AT1G52880 D 0.902
BGIOSGA025410 Oryza indica BGIOSGA025410 I 0.872
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.958
BGIOSGA036920 Oryza indica BGIOSGA036920 I 0.872
Bo1g128420 Brassica oleracea Bo1g128420 I 0.898
Bo6g030920 Brassica oleracea Bo6g030920 I 0.904
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.902
Bra018997 Brassica rapa Bra018997 I 0.904
Bra021114 Brassica rapa Bra021114 I 0.898
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.958
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.879
BRADI1G53770 Brachypodium distachyon BRADI1G53770 I 0.886
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.941
BRADI2G24987 Brachypodium distachyon BRADI2G24987 I 0.874
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.903
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.903
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.878
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.914
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.871
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.900
F775_02308 Aegilops tauschii F775_02308 I 0.944
F775_02328 Aegilops tauschii F775_02328 I 0.963
F775_04075 Aegilops tauschii F775_04075 N 0.913
F775_14365 Aegilops tauschii F775_14365 I 0.885
F775_16000 Aegilops tauschii F775_16000 I 0.885
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.898
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.875
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.871
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.908
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.881
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.871
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.871
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.944
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.954
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.920
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.962
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.931
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.907
GSMUA_Achr4G10310_001 Musa acuminata GSMUA_Achr4G10310_001 I 0.879
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.912
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.893
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.922
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.918
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.875
LPERR01G00250 Leersia perrieri LPERR01G00250 I 0.878
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.949
LPERR07G23420 Leersia perrieri LPERR07G23420 N 0.905
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.924
Lus10015076.g Linum usitatissimum Lus10015076.g N 0.887
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.924
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.889
MDP0000120881 Malus domestica MDP0000120881 I 0.874
MDP0000173636 Malus domestica MDP0000173636 I 0.875
MDP0000674514 Malus domestica MDP0000674514 I 0.907
mgf007362m Mimulus guttatus mgf007362m I 0.879
mgf016382m Mimulus guttatus mgf016382m I 0.879
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.944
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.885
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.881
OB03G25680 Oryza brachyantha OB03G25680 I 0.944
OB05G24480 Oryza brachyantha OB05G24480 I 0.923
OB07G15670 Oryza brachyantha OB07G15670 I 0.880
OB07G32110 Oryza brachyantha OB07G32110 I 0.946
OB11G11210 Oryza brachyantha OB11G11210 I 0.881
OB12G11500 Oryza brachyantha OB12G11500 I 0.883
OBART03G15960 Oryza barthii OBART03G15960 I 0.949
OBART07G07600 Oryza barthii OBART07G07600 I 0.872
OBART07G26600 Oryza barthii OBART07G26600 I 0.958
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.949
OGLUM07G07280 Oryza glumaepatula OGLUM07G07280 I 0.872
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.958
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.958
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.949
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.955
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.872
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.949
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.958
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.888
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.949
ONIVA07G06360 Oryza nivara ONIVA07G06360 I 0.872
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.952
OPUNC03G15460 Oryza punctata OPUNC03G15460 I 0.941
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.884
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.949
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.872
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.872
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.949
ORGLA07G0064400 Oryza glaberrima ORGLA07G0064400 I 0.872
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.958
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.949
ORUFI07G07590 Oryza rufipogon ORUFI07G07590 I 0.872
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.958
OS03G0327800 Oryza sativa OS03G0327800 I 0.946
NAC67 Oryza sativa OS07G0225300 I 0.872
OS12G0123700 Oryza sativa OS12G0123700 I 0.872
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.913
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.898
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.906
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.970
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.916
Pm009955 Prunus mume Pm009955 I 0.871
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.875
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.871
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.875
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.953
Sb02g043210 Sorghum bicolor Sb02g043210 I 0.955
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.873
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.898
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.873
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.898
Si002386m.g Setaria italica Si002386m.g N 0.877
Si010410m.g Setaria italica Si010410m.g I 0.873
Si030267m.g Setaria italica Si030267m.g I 0.963
Si030477m.g Setaria italica Si030477m.g N 0.873
Si036303m.g Setaria italica Si036303m.g I 0.911
TCM_029931 Theobroma cacao TCM_029931 I 0.871
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.908
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.880
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.885
Traes_2AS_125195CDF Triticum aestivum Traes_2AS_125195CDF N 0.899
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.880
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.965
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.965
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.885
Traes_2DS_85FE89BC5 Triticum aestivum Traes_2DS_85FE89BC5 N 0.949
Traes_2DS_F5B34D422 Triticum aestivum Traes_2DS_F5B34D422 N 0.906
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.944
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.944
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.885
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.885
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.944
TRIUR3_32458 Triticum urartu TRIUR3_32458 N 0.920
anac025 Vitis vinifera VIT_00s0375g00040 I 0.914
anac047 Vitis vinifera VIT_08s0007g07670 I 0.884
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.873