Pavir.Da01643 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Da01643 T298806_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.956 0.617
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.956 0.617
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.949 0.643
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.949 0.643
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.946 0.600
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.946 0.600
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da01643.1.p NAC/NAM 59 197

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB05056.1 Alternaria brassicicola AB05056.1 N
AB07764.1 Alternaria brassicicola AB07764.1 N
AUEXF2481DRAFT_152 Aureobasidium subglaciale AUEXF2481DRAFT_152 N
BAUCODRAFT_118634 Baudoinia compniacensis BAUCODRAFT_118634 I
Bcin04g01240 Botrytis cinerea Bcin04g01240 I
Bcin11g04510 Botrytis cinerea Bcin11g04510 N
BGHDH14_bgh04332 Blumeria graminis BGHDH14_bgh04332 N
ACLA_050890 Aspergillus clavatus CADACLAG00004878 N
CADAFLAG00002161 Aspergillus flavus CADAFLAG00002161 N
AFUA_4G11850 Aspergillus fumigatus CADAFUAG00008171 N
ANIA_05533 Aspergillus nidulans CADANIAG00003549 N
NFIA_104380 Neosartorya fischeri CADNFIAG00009977 N
CGGC5_7996 Colletotrichum gloeosporioides CGGC5_7996 N
CH063_00504 Colletotrichum higginsianum CH063_00504 N
CIMG_01608 Coccidioides immitis CIMG_01608 N
Cob_05618 Colletotrichum orbiculare Cob_05618 N
COCC4DRAFT_137441 Bipolaris maydis COCC4DRAFT_137441 N
COCC4DRAFT_160626 Bipolaris maydis COCC4DRAFT_160626 N
COCCADRAFT_105405 Bipolaris zeicola COCCADRAFT_105405 N
COCCADRAFT_7354 Bipolaris zeicola COCCADRAFT_7354 N
COCMIDRAFT_6100 Bipolaris oryzae COCMIDRAFT_6100 N
COCMIDRAFT_94153 Bipolaris oryzae COCMIDRAFT_94153 N
COCSADRAFT_229975 Bipolaris sorokiniana COCSADRAFT_229975 N
COCSADRAFT_324435 Bipolaris sorokiniana COCSADRAFT_324435 N
COCVIDRAFT_27743 Bipolaris victoriae COCVIDRAFT_27743 N
COCVIDRAFT_95708 Bipolaris victoriae COCVIDRAFT_95708 N
CPC735_048660 Coccidioides posadasii CPC735_048660 N
CPUR_07267 Claviceps purpurea CPUR_07267 N
CSUB01_03005 Colletotrichum sublineola CSUB01_03005 N
DOTSEDRAFT_68927 Dothistroma septosporum DOTSEDRAFT_68927 N
DRE_02202 Drechslerella stenobrocha DRE_02202 I
estExt_Genewise1.C_120294 Neurospora discreta estExt_Genewise1.C_120294 I
estExt_Genewise1.C_31830 Neurospora discreta estExt_Genewise1.C_31830 N
EV44_g1635 Erysiphe necator EV44_g1635 N
e_gw1.00009.84.1 Aspergillus carbonarius e_gw1.00009.84.1 N
e_gw1.1.1647.1 Nectria haematococca e_gw1.1.1647.1 N
e_gw1.9.820.1 Cochliobolus heterostrophus C5 e_gw1.9.820.1 N
FFUJ_06813 Fusarium fujikuroi FFUJ_06813 N
fgenesh1_pg.C_scaffold_1000879 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1000879 N
FOMPIDRAFT_1024907 Fomitopsis pinicola FOMPIDRAFT_1024907 I
GGTG_09987 Gaeumannomyces graminis GGTG_09987 N
GLRG_10847 Colletotrichum graminicola GLRG_10847 N
GMDG_00534 Pseudogymnoascus destructans GMDG_00534 N
H072_9722 Dactylellina haptotyla H072_9722 N
HMPREF1120_08148 Exophiala dermatitidis HMPREF1120_08148 I
LEMA_P055840.1 Leptosphaeria maculans LEMA_P055840.1 N
M437DRAFT_77772 Aureobasidium melanogenum M437DRAFT_77772 N
M438DRAFT_349770 Aureobasidium pullulans M438DRAFT_349770 N
MAJ_08454 Metarhizium majus MAJ_08454 N
MBM_05784 Marssonina brunnea MBM_05784 N
MGG_05153 Magnaporthe oryzae MGG_05153 I
MGG_08753 Magnaporthe oryzae MGG_08753 N
MPH_05214 Macrophomina phaseolina MPH_05214 N
MYCFIDRAFT_76004 Pseudocercospora fijiensis MYCFIDRAFT_76004 N
MYCTH_2299657 Myceliophthora thermophila MYCTH_2299657 N
NCU05294 Neurospora crassa NCU05294 D
NechaG30529 Fusarium solani NechaG30529 N
NEUTE1DRAFT_121594 Neurospora tetrasperma NEUTE1DRAFT_121594 I
NEUTE1DRAFT_78259 Neurospora tetrasperma NEUTE1DRAFT_78259 N
OCS_01600 Ophiocordyceps sinensis OCS_01600 I
OIDMADRAFT_122144 Oidiodendron maius OIDMADRAFT_122144 N
Pc22g04960 Penicillium chrysogenum Pc22g04960 N
PCH_Pc22g04960 Penicillium rubens PCH_Pc22g04960 N
PDE_08558 Penicillium oxalicum PDE_08558 I
PDIP_42870 Penicillium digitatum PDIP_42870 N
PEX1_006710 Penicillium expansum PEX1_006710 N
PFICI_15376 Pestalotiopsis fici PFICI_15376 N
PITC_093240 Penicillium italicum PITC_093240 N
PMAA_041870 Penicillium marneffei PMAA_041870 I
PMAA_041870 Talaromyces marneffei PMAA_041870 I
PTRG_00667 Pyrenophora triticirepentis PTRG_00667 N
PTRG_06548 Pyrenophora triticirepentis PTRG_06548 N
PTT_18058 Pyrenophora teres PTT_18058 N
PV09_02355 Verruconis gallopava PV09_02355 N
PVAR5_3215 Byssochlamys spectabilis PVAR5_3215 I
SEPMUDRAFT_146288 Sphaerulina musiva SEPMUDRAFT_146288 N
SETTUDRAFT_160687 Setosphaeria turcica SETTUDRAFT_160687 N
SETTUDRAFT_165742 Setosphaeria turcica SETTUDRAFT_165742 N
SMAC_01696 Sordaria macrospora SMAC_01696 I
SMAC_03029 Sordaria macrospora SMAC_03029 N
SNOG_06887 Phaeosphaeria nodorum SNOG_06887 N
SNOG_06887 Stagonospora nodorum SNOG_06887 N
THITE_2115656 Thielavia terrestris THITE_2115656 I
THITE_2116108 Thielavia terrestris THITE_2116108 N
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I
TSTA_076120 Talaromyces stipitatus TSTA_076120 I
U727_00433920131 Penicillium solitum U727_00433920131 N
UCRNP2_5943 Neofusicoccum parvum UCRNP2_5943 N
V499_04709 Pseudogymnoascus pannorum V499_04709 N
VDAG_08992 Verticillium dahliae VDAG_08992 I
VHEMI01402 Torrubiella hemipterigena VHEMI01402 N
VHEMI02684 Torrubiella hemipterigena VHEMI02684 N
W97_00715 Coniosporium apollinis W97_00715 N
X797_004155 Metarhizium robertsii X797_004155 N