Pavir.J00477 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J00477 T298918_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC035
M07186_2.00 		Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG		 Dap-seq
OMalley et al.(2016)
ANAC034_col 		0.917 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00477.1.p NAC/NAM 47 172

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O7_01858 Cladophialophora yegresii A1O7_01858 N 0.000
A1O9_12533 Exophiala aquamarina A1O9_12533 N 0.000
A1Q1_02722 Trichosporon asahii A1Q1_02722 N 0.000
G647_09977 Cladophialophora carrionii G647_09977 N 0.000
PV05_09642 Exophiala xenobiotica PV05_09642 N 0.000
Z518_10469 Rhinocladiella mackenziei Z518_10469 N 0.000