CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004330m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10004330m.g
T299206_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.970
1.000
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004330m
NAC/NAM
50
175
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTRTSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BOTBODRAFT_34149
Botryobasidium botryosum
BOTBODRAFT_34149
N
0.000
CERSUDRAFT_80391
Ceriporiopsis subvermispora
CERSUDRAFT_80391
N
0.000
M408DRAFT_74255
Serendipita vermifera
M408DRAFT_74255
N
0.000
PIIN_02946
Piriformospora indica
PIIN_02946
N
0.000