nfxl1 (Xenopus tropicalis)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 XB-GENE-964724 T301013_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSXETG00000015341_CONSTRUCT
M01294_2.00 		PBM CONSTRUCTS
WAGACGCA
TGCGTCTW		 PBM
Lambert et al.(2019)
pTH9831 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI59391 NFX 1 11
AAI59391 NFX 21 32
AAI59391 NFX 102 113
AAI59391 NFX 143 160
AAI59391 NFX 205 225

Links

Other NFX family TFs
Other Xenopus tropicalis TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXETG00000015341_CONSTRUCT PBM CONSTRUCTS ENSXETG00000015341_CONSTRUCT D 0.972