CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG22881
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG22881
T301613_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG23697_CONSTRUCT
M01299_2.00
PBM CONSTRUCTS
NNTKTGTGTYN
NRACACAMANN
PBM
Lambert et al.(2019)
pTH11459
0.756
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG22881
Nuclear receptor
5
75
KNCQICHIPTNGKRHYGVVSCRACAAFFRRAGCSNRSKKCKKLKNCVAKEDGFFACKFCRLQKCLNAGMSS
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_066760
Acremonium chrysogenum
ACRE_066760
N
Bcin13g03660
Botrytis cinerea
Bcin13g03660
N
CFIO01_13490
Colletotrichum fioriniae
CFIO01_13490
N
CMQ_7755
Grosmannia clavigera
CMQ_7755
N
CSUB01_00741
Colletotrichum sublineola
CSUB01_00741
N
EPUS_02971
Endocarpon pusillum
EPUS_02971
N
estExt_fgenesh1_pg.C_40017
Cryphonectria parasitica
estExt_fgenesh1_pg.C_40017
N
EV44_g2543
Erysiphe necator
EV44_g2543
N
FGRRES_02718
Fusarium graminearum
FGRRES_02718
N
FPSE_06488
Fusarium pseudograminearum
FPSE_06488
N
GGTG_06715
Gaeumannomyces graminis
GGTG_06715
N
GLRG_11249
Colletotrichum graminicola
GLRG_11249
N
MBM_06419
Marssonina brunnea
MBM_06419
N
MGG_01130
Magnaporthe oryzae
MGG_01130
N
OIDMADRAFT_123417
Oidiodendron maius
OIDMADRAFT_123417
N
S40285_03706
Stachybotrys chlorohalonata
S40285_03706
N
S40288_09128
Stachybotrys chartarum
S40288_09128
N
SBOR_3943
Sclerotinia borealis
SBOR_3943
N
SS1G_02497
Sclerotinia sclerotiorum
SS1G_02497
N
VDAG_09672
Verticillium dahliae
VDAG_09672
N
VDBG_07807
Verticillium alfalfae
VDBG_07807
N
VDBG_07807
Verticillium albo atrum
VDBG_07807
N
VHEMI07500
Torrubiella hemipterigena
VHEMI07500
N