CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN31048
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN31048
T301870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.870
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN31048
Nuclear receptor
34
103
DTCRVCGDGNAKTHYGVVTCFGCKGFFRRTLKRPSEYACRHNGNCVVDRHERNSCRYCRFKKCIEVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF13345
Drosophila ananassae
FBgn0090377
I
GG23012
Drosophila erecta
FBgn0115169
I
GL17691
Drosophila persimilis
FBgn0155294
I
GM11907
Drosophila sechellia
FBgn0166848
I
GD11905
Drosophila simulans
FBgn0183644
I
GK21677
Drosophila willistoni
FBgn0223662
I
GA24876
Drosophila pseudoobscura
FBgn0246261
I
Atf-2
Drosophila melanogaster
FBgn0265193
D