CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA28065
(
Caenorhabditis japonica
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CJA28065
T301998_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR
YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.984
0.829
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.868
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA28065
Nuclear receptor
18
88
HECLICAHSAHGVHFGVLSCRACAAFFRRSVVLNKKYTCRKINQDCRIDKNERYLCRLCRYEKCLQLGMTA
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis japonica
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003097
Aedes aegypti
AAEL003097
N
AALB004109
Anopheles albimanus
AALB004109
N
Aan_R005984
Calypte anna
Aan_R005984
N
AARA007796
Anopheles arabiensis
AARA007796
N
AATE013496
Anopheles atroparvus
AATE013496
N
ACEP21389
Atta cephalotes
ACEP21389
N
ACHR000042
Anopheles christyi
ACHR000042
N
ACOM025306
Anopheles coluzzii
ACOM025306
N
ACUA024194
Anopheles culicifacies
ACUA024194
N
ACYPI47146
Acyrthosiphon pisum
ACYPI47146
N
ADIR008028
Anopheles dirus
ADIR008028
N
AEPI000476
Anopheles epiroticus
AEPI000476
N
AFAF008223
Anopheles farauti
AFAF008223
N
Afo_R003276
Aptenodytes forsteri
Afo_R003276
N
AFUN008052
Anopheles funestus
AFUN008052
N
AGAP007133
Anopheles gambiae
AGAP007133
N
AMEC009276
Anopheles melas
AMEC009276
N
AMEM004763
Anopheles merus
AMEM004763
N
AMIN011274
Anopheles minimus
AMIN011274
N
AQUA002064
Anopheles quadriannulatus
AQUA002064
N
ASTEI06908
Anopheles stephensi
ASTEI06908
N
CapteG124203
Capitella teleta
CapteG124203
N
CGI_10022084
Crassostrea gigas
CGI_10022084
N
CPIJ003689
Culex quinquefasciatus
CPIJ003689
N
CpipJ_CPIJ003689
Culex pipiens
CpipJ_CPIJ003689
N
DAPPUDRAFT_312030
Daphnia pulex
DAPPUDRAFT_312030
N
ENSAMEG00000006258
Ailuropoda melanoleuca
ENSAMEG00000006258
N
CAMTA2
Bos taurus
ENSBTAG00000008591
N
ENSBTAP00000011330-D1
Bos grunniens
ENSBTAP00000011330-D1
N
CAMTA2
Canis familiaris
ENSCAFG00000015674
N
CAMTA1
Canis familiaris
ENSCAFG00000019650
N
CAMTA2
Callithrix jacchus
ENSCJAG00000011609
N
CAMTA2
Cavia porcellus
ENSCPOG00000007319
N
CAMTA1
Cavia porcellus
ENSCPOG00000014759
N
ENSCSAG00000012903
Chlorocebus sabaeus
ENSCSAG00000012903
N
camta1a
Danio rerio
ENSDARG00000077428
N
CAMTA2
Dasypus novemcinctus
ENSDNOG00000036357
N
Camta1
Dipodomys ordii
ENSDORG00000003017
N
Camta2
Dipodomys ordii
ENSDORG00000011763
N
CAMTA2
Equus caballus
ENSECAG00000019370
N
ENSFALG00000009834
Ficedula albicollis
ENSFALG00000009834
N
CAMTA2
Felis catus
ENSFCAG00000008698
N
CAMTA2
Homo sapiens
ENSG00000108509
N
CAMTA1
Homo sapiens
ENSG00000171735
N
ENSGACG00000001106
Gasterosteus aculeatus
ENSGACG00000001106
N
camta1b
Gasterosteus aculeatus
ENSGACG00000007914
N
CAMTA1
Gorilla gorilla
ENSGGOG00000003577
N
CAMTA2
Gorilla gorilla
ENSGGOG00000009188
N
ENSGMOG00000017650
Gadus morhua
ENSGMOG00000017650
N
ENSGMOG00000019408
Gadus morhua
ENSGMOG00000019408
N
ENSLACG00000014574
Latimeria chalumnae
ENSLACG00000014574
N
CAMTA2
Loxodonta africana
ENSLAFG00000012042
N
ENSLOCG00000013712
Lepisosteus oculatus
ENSLOCG00000013712
N
CAMTA2
Microcebus murinus
ENSMICG00000012537
N
CAMTA2
Myotis lucifugus
ENSMLUG00000014019
N
CAMTA2
Macaca mulatta
ENSMMUG00000009176
N
ENSMPUG00000006733
Mustela putorius furo
ENSMPUG00000006733
N
ENSMPUG00000011010
Mustela putorius furo
ENSMPUG00000011010
N
Camta1
Mus musculus
ENSMUSG00000014592
N
Camta2
Mus musculus
ENSMUSG00000040712
N
ENSOANG00000030450
Ornithorhynchus anatinus
ENSOANG00000030450
N
ENSOARG00000004897
Ovis aries
ENSOARG00000004897
N
CAMTA2
Oryctolagus cuniculus
ENSOCUG00000001109
N
CAMTA2
Otolemur garnettii
ENSOGAG00000014734
N
ENSONIG00000004505
Oreochromis niloticus
ENSONIG00000004505
N
ENSONIG00000019368
Oreochromis niloticus
ENSONIG00000019368
N
CAMTA1
Ochotona princeps
ENSOPRG00000015968
N
camta1b
Oryzias latipes
ENSORLG00000016337
N
ENSP00000306522-D1
Bos grunniens
ENSP00000306522-D1
N
ENSP00000321813
Macaca fascicularis
ENSP00000321813
N
ENSPANG00000024316
Papio anubis
ENSPANG00000024316
N
ENSPFOG00000000859
Poecilia formosa
ENSPFOG00000000859
N
ENSPFOG00000016244
Poecilia formosa
ENSPFOG00000016244
N
ENSPPYG00000001932
Pongo abelii
ENSPPYG00000001932
N
ENSPPYG00000007853
Pongo abelii
ENSPPYG00000007853
N
ENSPSIG00000004616
Pelodiscus sinensis
ENSPSIG00000004616
N
CAMTA1
Pan troglodytes
ENSPTRG00000000096
N
CAMTA2
Pteropus vampyrus
ENSPVAG00000003768
N
CAMTA1
Pteropus vampyrus
ENSPVAG00000005390
N
Camta2
Rattus norvegicus
ENSRNOG00000004283
N
Camta1
Rattus norvegicus
ENSRNOG00000018602
N
CAMTA2
Sorex araneus
ENSSARG00000004137
N
CAMTA2
Sus scrofa
ENSSSCG00000017902
N
ENSSTOG00000003897
Ictidomys tridecemlineatus
ENSSTOG00000003897
N
ENSSTOG00000011183
Ictidomys tridecemlineatus
ENSSTOG00000011183
N
CAMTA1
Taeniopygia guttata
ENSTGUG00000002566
N
ENSTNIG00000003621
Tetraodon nigroviridis
ENSTNIG00000003621
N
camta1b
Takifugu rubripes
ENSTRUG00000010941
N
CAMTA2
Tursiops truncatus
ENSTTRG00000001303
N
CAMTA1
Tursiops truncatus
ENSTTRG00000010366
N
ENSXMAG00000001955
Xiphophorus maculatus
ENSXMAG00000001955
N
ENSXMAG00000018742
Xiphophorus maculatus
ENSXMAG00000018742
N
e_gw.96.31.1
Branchiostoma floridae
e_gw.96.31.1
N
GD10658
Drosophila simulans
FBgn0182425
N
Camta
Drosophila melanogaster
FBgn0259234
N
GA30460
Drosophila pseudoobscura
FBgn0264597
N
fgenesh2_pg.scaffold_96000095
Branchiostoma floridae
fgenesh2_pg.scaffold_96000095
N
Gfo_R002636
Geospiza fortis
Gfo_R002636
N
Hsal_08954--XP_001120489.1_APIME
Harpegnathos saltator
Hsal_08954--XP_001120489.1_APIME
N
ISCW018640
Ixodes scapularis
ISCW018640
N
KGM_18441
Danaus plexippus
KGM_18441
N
L798_01998
Zootermopsis nevadensis
L798_01998
N
LCUP001199
Lucilia cuprina
LCUP001199
N
MDOA011429
Musca domestica
MDOA011429
N
Myotis_brandtii_CAMTA2_10007480
Myotis brandtii
Myotis_brandtii_CAMTA2_10007480
N
Ogr01933
Ophisaurus gracilis
Ogr01933
N
PHUM466620
Pediculus humanus
PHUM466620
N
PPAI004941
Phlebotomus papatasi
PPAI004941
N
Pvit_07906
Pogona vitticeps
Pvit_07906
N
RPRC011455
Rhodnius prolixus
RPRC011455
N
Sakowv30004245m.g
Saccoglossus kowalevskii
Sakowv30004245m.g
N
SMAR001697
Strigamia maritima
SMAR001697
N
TC012001
Tribolium castaneum
TC012001
N
camta2
Xenopus tropicalis
XB-GENE-1033052
N
XP_002933905
Xenopus tropicalis
XP_002933905
N
YQE_00135
Dendroctonus ponderosae
YQE_00135
N
YQE_00136
Dendroctonus ponderosae
YQE_00136
N