CRE00427 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE00427 T302036_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.980 0.900
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.980 0.886
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.968 0.843
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.968 0.843
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.968 0.843
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.968 0.829
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.963 0.829
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.957 0.829
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.950 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00427 Nuclear receptor 100 170

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010576 Ailuropoda melanoleuca ENSAMEG00000010576 I
ZNF205 Bos taurus ENSBTAG00000005572 I
ENSBTAP00000007323-D1 Bos grunniens ENSBTAP00000007323-D1 I
ZNF205 Canis familiaris ENSCAFG00000023869 I
ZNF205 Callithrix jacchus ENSCJAG00000015546 I
ENSCSAG00000010150 Chlorocebus sabaeus ENSCSAG00000010150 I
ZNF205 Equus caballus ENSECAG00000009869 I
ZNF205 Erinaceus europaeus ENSEEUG00000010049 I
ENSETEG00000002476 Echinops telfairi ENSETEG00000002476 I
ZNF205 Felis catus ENSFCAG00000026028 I
ZNF205 Homo sapiens ENSG00000122386 D
ZNF205 Gorilla gorilla ENSGGOG00000012036 I
ZNF205 Loxodonta africana ENSLAFG00000021564 I
ENSMEUG00000004328 Macropus eugenii ENSMEUG00000004328 I
ZNF205 Microcebus murinus ENSMICG00000009089 I
ZNF205 Macaca mulatta ENSMMUG00000009487 I
ENSMPUG00000015184 Mustela putorius furo ENSMPUG00000015184 I
Zfp13 Mus musculus ENSMUSG00000062012 I
ENSNLEG00000009600 Nomascus leucogenys ENSNLEG00000009600 I
ENSOARG00000001319 Ovis aries ENSOARG00000001319 I
ZNF205 Otolemur garnettii ENSOGAG00000003693 I
ZNF205 Ochotona princeps ENSOPRG00000005820 I
ENSP00000219091 Macaca fascicularis ENSP00000219091 I
ENSPANG00000024398 Papio anubis ENSPANG00000024398 I
ENSPPYG00000007034 Pongo abelii ENSPPYG00000007034 I
ZNF205 Pan troglodytes ENSPTRG00000007686 I
ZNF205 Pteropus vampyrus ENSPVAG00000001475 I
Zfp13 Rattus norvegicus ENSRNOG00000003455 I
ZNF205 Sorex araneus ENSSARG00000006551 I
ZNF205 Sus scrofa ENSSSCG00000029375 I
ENSSTOG00000003803 Ictidomys tridecemlineatus ENSSTOG00000003803 I
Myotis_brandtii_ZNF205_10028065 Myotis brandtii Myotis_brandtii_ZNF205_10028065 I