CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPARD
(
Choloepus hoffmanni
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSCHOG00000008796
T302667_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.451
1.000
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.451
1.000
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.451
1.000
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.451
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000007780
Nuclear receptor
72
101
MECRVCGDKASGFHYGVHACEGCKXXXXXX
Links
Other
Nuclear receptor
family TFs
Other
Choloepus hoffmanni
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF623
Bos taurus
ENSBTAG00000045791
N
ENSOARG00000008591
Ovis aries
ENSOARG00000008591
N
ENSOARG00000016599
Ovis aries
ENSOARG00000016599
N
ENSP00000330358-D1
Bos grunniens
ENSP00000330358-D1
N