ENSGMOG00000003742 (Gadus morhua)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSGMOG00000003742 T303420_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr4a2
M00818_2.00 		Mus musculus
AAAGGTCA
TGACCTTT		 PBM
Weirauch et al.(2013)
pTH3467 		0.993 0.943
NR4A2
M03383_2.00 		Homo sapiens
AGGTCAHNNNDTGACCT
AGGTCAHNNNDTGACCT		 SELEX
Jolma et al.(2013)
NR4A2_1 		0.993 0.943
NR4A2
M03384_2.00 		Homo sapiens
TGACCTTTAAAGGTCA
TGACCTTTAAAGGTCA		 SELEX
Jolma et al.(2013)
NR4A2_2 		0.993 0.943
NR4A2
M03385_2.00 		Homo sapiens
NBTAAAGGTCA
TGACCTTTAVN		 SELEX
Jolma et al.(2013)
NR4A2_3 		0.993 0.943
NR4A2
M05639_2.00 		Homo sapiens
NWAAKGTCAN
NTGACMTTWN		 SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX 		0.993 0.943
NR4A2
M05881_2.00 		Homo sapiens
NAAAKGTYA
TRACMTTTN		 SMiLE-seq
Isakova et al.(2017)
NR4A2 		0.993 0.943
NR4A2
M09286_2.00 		Homo sapiens
RAAGGTCAV
BTGACCTTY		 Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C 		0.993 0.943
Nr4a2
M09323_2.00 		Mus musculus
RAAGGTCAV
BTGACCTTY		 Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C 		0.993 0.943
NR4A2
M11151_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NURR1_Q3_01 		0.993 0.943
NR4A2
M11152_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NURR1_Q3 		0.993 0.943
NR4A2
M08461_2.00 		Homo sapiens
RAGGTCAM
KTGACCTY		 COMPILED
Mathelier et al.(2014)
MA0160.1 		0.993 0.943
NR4A2
M05640_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX 		0.993 0.943
NR4A1
M05601_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1 		0.986 0.886
NR4A1
M05602_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2 		0.986 0.886
NR4A1
M08153_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 ChIP-seq
Mathelier et al.(2014)
MA1112.1 		0.986 0.886
NR4A1
M09274_2.00 		Homo sapiens
AAAKGBCAN
NTGVCMTTT		 Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A 		0.986 0.886
NR4A1
M09608_2.00 		Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN		 Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363 		0.986 0.886
NR4A1
M11132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_01 		0.986 0.886
NR4A1
M11133_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_02 		0.986 0.886
NR4A1
M11134_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5 		0.986 0.886
NR4A1
M05603_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1 		0.986 0.886
NR4A1
M05604_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2 		0.986 0.886
Nr4a1
M09317_2.00 		Mus musculus
NRAADGKCA
TGMCHTTYN		 Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B 		0.986 0.871
Hr38
M03939_2.00 		Drosophila melanogaster
NAAAGGTCA
TGACCTTTN		 SELEX
Nitta et al.(2015)
Hr38_1 		0.982 0.886
nhr-6
M01298_2.00 		Caenorhabditis elegans
AAAKGTCA
TGACMTTT		 PBM
Lambert et al.(2019)
pTH9944 		0.954 0.729
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.880 0.571
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.864 0.629
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.864 0.629
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.864 0.629
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.864 0.629
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.864 0.629
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.864 0.629
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.861 0.614
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.855 0.614
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.855 0.614
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.855 0.614
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.855 0.614
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.855 0.614
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.855 0.614
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.855 0.614
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.855 0.614
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.855 0.614
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.853 0.557
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.853 0.557
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.853 0.557
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.852 0.600
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.852 0.600
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.852 0.600
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.852 0.600
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.852 0.600
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.852 0.600
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.852 0.600
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.852 0.600
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.852 0.600
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.852 0.600
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.852 0.600
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.852 0.600
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.852 0.600
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.852 0.600
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.852 0.600
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.847 0.600
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.847 0.600
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.847 0.600
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.847 0.600
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.847 0.600
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.847 0.600
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.847 0.600
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.847 0.600
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.847 0.600
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.847 0.600
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.847 0.600
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.847 0.600
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.847 0.600
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.805 0.557
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.805 0.557
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.805 0.557
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.805 0.557
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.805 0.557
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.805 0.557
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.805 0.557
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.805 0.557
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.796 0.571
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.796 0.571
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.796 0.571
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.796 0.571
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.796 0.571
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.796 0.571
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.796 0.571
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.796 0.571
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.795 0.557
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.795 0.557
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.795 0.557
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.795 0.557
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.795 0.557
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.795 0.557
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.795 0.557
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.795 0.557
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.795 0.557
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.795 0.557
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.795 0.557
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.793 0.571
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.793 0.571
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.793 0.571
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.793 0.571
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.793 0.571
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.793 0.571
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.793 0.571
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.793 0.571
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.793 0.571
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.793 0.571
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.793 0.571
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.793 0.571
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.793 0.571
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.793 0.571
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.793 0.571
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.793 0.571
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.793 0.571
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.791 0.543
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.791 0.543
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.791 0.543
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.791 0.543
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.791 0.543
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.778 0.557
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.778 0.557
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.778 0.557
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.778 0.557
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.778 0.557
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.778 0.557
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.778 0.557
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.778 0.557
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.774 0.543
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.774 0.543
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.774 0.543
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.774 0.543
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.774 0.543
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.774 0.543
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.774 0.543
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.774 0.543
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.774 0.543
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.774 0.543
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.774 0.543
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.774 0.543
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.774 0.543
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.774 0.543
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.767 0.543
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.767 0.543
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.767 0.543
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.767 0.543
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.767 0.543
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.767 0.543
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.764 0.543
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.764 0.543
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.755 0.543
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.752 0.557
PPARD
M05581_2.00 		Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1 		0.748 0.529
PPARD
M05582_2.00 		Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2 		0.748 0.529
PPARD
M05583_2.00 		Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1 		0.748 0.529
PPARD
M05584_2.00 		Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2 		0.748 0.529
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.745 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000004000 Nuclear receptor 276 345
ENSGMOP00000004008 Nuclear receptor 284 353

Links

Other Nuclear receptor family TFs
Other Gadus morhua TFs

1443 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_09257 Capronia coronata A1O1_09257 I 0.000
A1O3_04716 Capronia epimyces A1O3_04716 I 0.000
A1O5_11654 Cladophialophora psammophila A1O5_11654 I 0.000
A1O7_09038 Cladophialophora yegresii A1O7_09038 I 0.000
A1O9_10475 Exophiala aquamarina A1O9_10475 I 0.000
AB10510.1 Alternaria brassicicola AB10510.1 I 0.000
ACRE_078430 Acremonium chrysogenum ACRE_078430 I 0.000
AOL_s00054g426 Arthrobotrys oligospora AOL_s00054g426 I 0.000
ARB_04330 Arthroderma benhamiae ARB_04330 I 0.000
AUEXF2481DRAFT_4723 Aureobasidium subglaciale AUEXF2481DRAFT_4723 I 0.000
BAUCODRAFT_46155 Baudoinia compniacensis BAUCODRAFT_46155 I 0.000
BBA_09764 Beauveria bassiana BBA_09764 I 0.000
Bcin08g06620 Botrytis cinerea Bcin08g06620 I 0.000
BDDG_01924 Blastomyces dermatitidis BDDG_01924 I 0.000
BGHDH14_bgh05455 Blumeria graminis BGHDH14_bgh05455 I 0.000
ACLA_049440 Aspergillus clavatus CADACLAG00004607 I 0.000
CADAFLAG00002000 Aspergillus flavus CADAFLAG00002000 I 0.000
AFUA_4G10220 Aspergillus fumigatus CADAFUAG00008139 I 0.000
CADANGAG00004383 Aspergillus niger CADANGAG00004383 I 0.000
ANIA_02009 Aspergillus nidulans CADANIAG00008677 I 0.000
CADAORAG00001740 Aspergillus oryzae CADAORAG00001740 I 0.000
ATEG_00707 Aspergillus terreus CADATEAG00006049 I 0.000
NFIA_105830 Neosartorya fischeri CADNFIAG00009642 I 0.000
CCM_01917 Cordyceps militaris CCM_01917 I 0.000
CFIO01_08636 Colletotrichum fioriniae CFIO01_08636 I 0.000
CGGC5_8911 Colletotrichum gloeosporioides CGGC5_8911 I 0.000
CH063_09099 Colletotrichum higginsianum CH063_09099 I 0.000
CHGG_07578 Chaetomium globosum CHGG_07578 I 0.000
CIMG_09071 Coccidioides immitis CIMG_09071 I 0.000
CMQ_7465 Grosmannia clavigera CMQ_7465 I 0.000
Cob_09008 Colletotrichum orbiculare Cob_09008 I 0.000
COCC4DRAFT_145536 Bipolaris maydis COCC4DRAFT_145536 I 0.000
COCCADRAFT_98536 Bipolaris zeicola COCCADRAFT_98536 I 0.000
COCMIDRAFT_97398 Bipolaris oryzae COCMIDRAFT_97398 I 0.000
COCSADRAFT_316172 Bipolaris sorokiniana COCSADRAFT_316172 I 0.000
COCVIDRAFT_35595 Bipolaris victoriae COCVIDRAFT_35595 I 0.000
CPC735_015080 Coccidioides posadasii CPC735_015080 I 0.000
CPUR_02900 Claviceps purpurea CPUR_02900 I 0.000
CSUB01_05911 Colletotrichum sublineola CSUB01_05911 I 0.000
CTHT_0069620 Chaetomium thermophilum CTHT_0069620 I 0.000
DOTSEDRAFT_69441 Dothistroma septosporum DOTSEDRAFT_69441 I 0.000
DRE_02305 Drechslerella stenobrocha DRE_02305 I 0.000
EPUS_00532 Endocarpon pusillum EPUS_00532 I 0.000
estExt_fgenesh1_pm.C_11052 Cryphonectria parasitica estExt_fgenesh1_pm.C_11052 I 0.000
estExt_fgenesh2_pg.C_10368 Neurospora discreta estExt_fgenesh2_pg.C_10368 I 0.000
estExt_Genewise1.C_230428 Cochliobolus heterostrophus C5 estExt_Genewise1.C_230428 I 0.000
estExt_Genewise1Plus.C_20760 Mycosphaerella fijiensis estExt_Genewise1Plus.C_20760 I 0.000
estExt_Genewise1Plus.C_chr_20819 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_20819 I 0.000
EURHEDRAFT_33024 Aspergillus ruber EURHEDRAFT_33024 I 0.000
EV44_g5529 Erysiphe necator EV44_g5529 I 0.000
e_gw1.17.43.1 Nectria haematococca e_gw1.17.43.1 I 0.000
F503_08379 Ophiostoma piceae uamh F503_08379 I 0.000
FFUJ_08943 Fusarium fujikuroi FFUJ_08943 I 0.000
FGRRES_09019 Fusarium graminearum FGRRES_09019 I 0.000
FPSE_07078 Fusarium pseudograminearum FPSE_07078 I 0.000
G647_07996 Cladophialophora carrionii G647_07996 I 0.000
GGTG_14272 Gaeumannomyces graminis GGTG_14272 I 0.000
GLRG_04843 Colletotrichum graminicola GLRG_04843 I 0.000
GMDG_01699 Pseudogymnoascus destructans GMDG_01699 I 0.000
H072_3561 Dactylellina haptotyla H072_3561 I 0.000
H101_04135 Trichophyton interdigitale H101_04135 I 0.000
H102_02623 Trichophyton rubrum H102_02623 I 0.000
H105_02641 Trichophyton soudanense H105_02641 I 0.000
HCBG_07805 Histoplasma capsulatum HCBG_07805 I 0.000
HMPREF1120_01387 Exophiala dermatitidis HMPREF1120_01387 I 0.000
HMPREF1541_09773 Cyphellophora europaea HMPREF1541_09773 I 0.000
HMPREF1624_02616 Sporothrix schenckii HMPREF1624_02616 I 0.000
LEMA_P109350.1 Leptosphaeria maculans LEMA_P109350.1 I 0.000
M437DRAFT_17573 Aureobasidium melanogenum M437DRAFT_17573 I 0.000
M438DRAFT_337107 Aureobasidium pullulans M438DRAFT_337107 I 0.000
M7I_3672 Glarea lozoyensis M7I_3672 I 0.000
MAC_07310 Metarhizium acridum MAC_07310 I 0.000
MAJ_09430 Metarhizium majus MAJ_09430 I 0.000
MAM_07140 Metarhizium album MAM_07140 I 0.000
MANI_005260 Metarhizium anisopliae MANI_005260 I 0.000
MAPG_09605 Magnaporthe poae MAPG_09605 I 0.000
MBM_01133 Marssonina brunnea MBM_01133 I 0.000
MBR_09861 Metarhizium brunneum MBR_09861 I 0.000
MCYG_05206 Microsporum canis MCYG_05206 I 0.000
MCYG_05206 Arthroderma otae MCYG_05206 I 0.000
MGG_04853 Magnaporthe oryzae MGG_04853 I 0.000
MGU_07058 Metarhizium guizhouense MGU_07058 I 0.000
MGYG_06249 Microsporum gypseum MGYG_06249 I 0.000
MPH_05440 Macrophomina phaseolina MPH_05440 I 0.000
MYCFIDRAFT_108409 Pseudocercospora fijiensis MYCFIDRAFT_108409 I 0.000
Mycgr3G68153 Zymoseptoria tritici Mycgr3G68153 I 0.000
MYCTH_2301643 Myceliophthora thermophila MYCTH_2301643 I 0.000
kal-1 Neurospora crassa NCU03593 D 0.000
NechaG46180 Fusarium solani NechaG46180 I 0.000
NEUTE1DRAFT_116070 Neurospora tetrasperma NEUTE1DRAFT_116070 I 0.000
OCS_03121 Ophiocordyceps sinensis OCS_03121 I 0.000
OIDMADRAFT_115588 Oidiodendron maius OIDMADRAFT_115588 I 0.000
PAAG_08226 Paracoccidioides sp lutzii PAAG_08226 I 0.000
PABG_03432 Paracoccidioides brasiliensis PABG_03432 I 0.000
Pc22g12610 Penicillium chrysogenum Pc22g12610 I 0.000
PCH_Pc22g12610 Penicillium rubens PCH_Pc22g12610 I 0.000
PDE_03945 Penicillium oxalicum PDE_03945 I 0.000
PDIP_25010 Penicillium digitatum PDIP_25010 I 0.000
PEX1_092370 Penicillium expansum PEX1_092370 I 0.000
PFICI_09611 Pestalotiopsis fici PFICI_09611 I 0.000
PITC_045370 Penicillium italicum PITC_045370 I 0.000
PMAA_096690 Talaromyces marneffei PMAA_096690 I 0.000
PMAA_096690 Penicillium marneffei PMAA_096690 I 0.000
PODANS_2_6460 Podospora anserina PODANS_2_6460 I 0.000
PTRG_06001 Pyrenophora triticirepentis PTRG_06001 I 0.000
PTT_08847 Pyrenophora teres PTT_08847 I 0.000
PV04_09430 Capronia semiimmersa PV04_09430 I 0.000
PV05_00128 Exophiala xenobiotica PV05_00128 I 0.000
PV06_08621 Exophiala oligosperma PV06_08621 I 0.000
PV07_00358 Cladophialophora immunda PV07_00358 I 0.000
PV08_02081 Exophiala spinifera PV08_02081 I 0.000
PV09_05176 Verruconis gallopava PV09_05176 I 0.000
PV10_04527 Exophiala mesophila PV10_04527 I 0.000
PV11_03368 Exophiala sideris PV11_03368 I 0.000
PVAR5_4295 Byssochlamys spectabilis PVAR5_4295 I 0.000
S40285_02237 Stachybotrys chlorohalonata S40285_02237 I 0.000
S40288_03762 Stachybotrys chartarum S40288_03762 I 0.000
SAPIO_CDS8330 Scedosporium apiospermum SAPIO_CDS8330 I 0.000
SBOR_4438 Sclerotinia borealis SBOR_4438 I 0.000
SEPMUDRAFT_147420 Sphaerulina musiva SEPMUDRAFT_147420 I 0.000
SETTUDRAFT_88112 Setosphaeria turcica SETTUDRAFT_88112 I 0.000
SMAC_03124 Sordaria macrospora SMAC_03124 I 0.000
SNOG_16027 Stagonospora nodorum SNOG_16027 I 0.000
SNOG_16027 Phaeosphaeria nodorum SNOG_16027 I 0.000
SPBR_02439 Sporothrix brasiliensis SPBR_02439 I 0.000
TEQG_04675 Trichophyton equinum TEQG_04675 I 0.000
TESG_03886 Trichophyton tonsurans TESG_03886 I 0.000
THITE_70031 Thielavia terrestris THITE_70031 I 0.000
TRIATDRAFT_229262 Trichoderma atroviride TRIATDRAFT_229262 I 0.000
TRIREDRAFT_77154 Trichoderma reesei TRIREDRAFT_77154 I 0.000
TRIVIDRAFT_36050 Trichoderma virens TRIVIDRAFT_36050 I 0.000
TRV_05560 Trichophyton verrucosum TRV_05560 I 0.000
TSTA_044650 Talaromyces stipitatus TSTA_044650 I 0.000
U727_00430330251 Penicillium solitum U727_00430330251 I 0.000
UCREL1_10957 Eutypa lata UCREL1_10957 I 0.000
UCRNP2_645 Neofusicoccum parvum UCRNP2_645 I 0.000
UCRPA7_6974 Togninia minima UCRPA7_6974 I 0.000
UREG_03315 Uncinocarpus reesii UREG_03315 I 0.000
UV8b_1861 Ustilaginoidea virens UV8b_1861 I 0.000
V499_08137 Pseudogymnoascus pannorum V499_08137 I 0.000
VDAG_05070 Verticillium dahliae VDAG_05070 I 0.000
VDBG_06534 Verticillium albo atrum VDBG_06534 I 0.000
VDBG_06534 Verticillium alfalfae VDBG_06534 I 0.000
VHEMI08470 Torrubiella hemipterigena VHEMI08470 I 0.000
W97_08853 Coniosporium apollinis W97_08853 I 0.000
X797_009738 Metarhizium robertsii X797_009738 I 0.000
YALI0_A18469g Yarrowia lipolytica YALI0_A18469g I 0.000
Z517_01632 Fonsecaea pedrosoi Z517_01632 I 0.000
Z518_03392 Rhinocladiella mackenziei Z518_03392 I 0.000
Z519_08645 Cladophialophora bantiana Z519_08645 I 0.000