ENSGMOG00000016490 (Gadus morhua)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSGMOG00000016490 T303460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.467 1.000
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.467 1.000
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.467 1.000
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.467 1.000
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.467 1.000
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.467 1.000
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.467 1.000
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.467 1.000
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.467 1.000
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.467 1.000
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.467 1.000
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.467 1.000
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.467 1.000
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.467 1.000
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.467 1.000
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.467 1.000
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.467 1.000
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.467 1.000
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.467 1.000
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.467 1.000
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.467 1.000
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.467 1.000
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.467 1.000
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.467 1.000
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.467 1.000
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.467 1.000
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.467 1.000
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000017693 Nuclear receptor 8 37

Links

Other Nuclear receptor family TFs
Other Gadus morhua TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009242 Calypte anna Aan_R009242 I 0.467
Aan_R015083 Calypte anna Aan_R015083 I 0.467
Afo_R002975 Aptenodytes forsteri Afo_R002975 I 0.467
Afo_R006180 Aptenodytes forsteri Afo_R006180 I 0.467
Alligator_sinensis_CCG007724.1 Alligator sinensis Alligator_sinensis_CCG007724.1 I 0.467
Brh_R003242 Buceros rhinoceros Brh_R003242 I 0.467
Brh_R004006 Buceros rhinoceros Brh_R004006 I 0.467
Cmyd_10000975 Chelonia mydas Cmyd_10000975 I 0.467
ENSAMEG00000000363 Ailuropoda melanoleuca ENSAMEG00000000363 I 0.467
ENSAMEG00000008017 Ailuropoda melanoleuca ENSAMEG00000008017 I 0.467
ENSAMEG00000015664 Ailuropoda melanoleuca ENSAMEG00000015664 I 0.467
ENSAMXG00000000403 Astyanax mexicanus ENSAMXG00000000403 I 0.467
ENSAMXG00000014990 Astyanax mexicanus ENSAMXG00000014990 I 0.467
ENSAMXG00000018669 Astyanax mexicanus ENSAMXG00000018669 I 0.467
ENSAPLG00000005866 Anas platyrhynchos ENSAPLG00000005866 I 0.467
ENSAPLG00000007187 Anas platyrhynchos ENSAPLG00000007187 I 0.467
RORA Bos taurus ENSBTAG00000015904 I 0.467
RORC Bos taurus ENSBTAG00000017405 I 0.467
RORB Bos taurus ENSBTAG00000021699 I 0.467
ENSBTAP00000021144-D1 Bos grunniens ENSBTAP00000021144-D1 I 0.467
ENSBTAP00000028921-D1 Bos grunniens ENSBTAP00000028921-D1 I 0.467
RORB Canis familiaris ENSCAFG00000001769 I 0.467
RORC Canis familiaris ENSCAFG00000012884 I 0.467
RORA Canis familiaris ENSCAFG00000016700 I 0.467
RORB Choloepus hoffmanni ENSCHOG00000009723 I 0.467
RORA Choloepus hoffmanni ENSCHOG00000011593 I 0.467
RORB Callithrix jacchus ENSCJAG00000001216 I 0.467
RORA Callithrix jacchus ENSCJAG00000003989 I 0.467
RORC Callithrix jacchus ENSCJAG00000008023 I 0.467
RORA Cavia porcellus ENSCPOG00000008494 I 0.467
RORB Cavia porcellus ENSCPOG00000010612 I 0.467
RORC Cavia porcellus ENSCPOG00000023600 I 0.467
ENSCSAG00000001825 Chlorocebus sabaeus ENSCSAG00000001825 I 0.467
ENSCSAG00000008161 Chlorocebus sabaeus ENSCSAG00000008161 I 0.467
ENSCSAG00000012081 Chlorocebus sabaeus ENSCSAG00000012081 I 0.467
rorab Danio rerio ENSDARG00000001910 I 0.467
roraa Danio rerio ENSDARG00000031768 I 0.467
rorb Danio rerio ENSDARG00000033498 I 0.467
rorca Danio rerio ENSDARG00000057231 I 0.467
RORC Dasypus novemcinctus ENSDNOG00000033488 I 0.467
RORA Dasypus novemcinctus ENSDNOG00000043276 I 0.467
Rora Dipodomys ordii ENSDORG00000001826 I 0.467
Rorb Dipodomys ordii ENSDORG00000008602 I 0.467
Rorc Dipodomys ordii ENSDORG00000015326 I 0.467
RORC Equus caballus ENSECAG00000000918 I 0.467
RORA Equus caballus ENSECAG00000016384 I 0.467
RORB Equus caballus ENSECAG00000024312 I 0.467
RORB Erinaceus europaeus ENSEEUG00000014274 I 0.467
RORA Erinaceus europaeus ENSEEUG00000015809 I 0.467
RORA Echinops telfairi ENSETEG00000001493 I 0.467
RORB Echinops telfairi ENSETEG00000017457 I 0.467
ENSFALG00000012589 Ficedula albicollis ENSFALG00000012589 I 0.467
ENSFALG00000012763 Ficedula albicollis ENSFALG00000012763 I 0.467
RORB Felis catus ENSFCAG00000011421 I 0.467
RORA Felis catus ENSFCAG00000013642 I 0.467
RORA Homo sapiens ENSG00000069667 D 0.467
RORC Homo sapiens ENSG00000143365 D 0.467
RORB Homo sapiens ENSG00000198963 D 0.467
roraa Gasterosteus aculeatus ENSGACG00000010672 I 0.467
rorb Gasterosteus aculeatus ENSGACG00000011556 I 0.467
RORA Gallus gallus ENSGALG00000003759 I 0.467
RORB Gallus gallus ENSGALG00000015150 I 0.467
ENSGALG00000025988 Gallus gallus ENSGALG00000025988 I 0.467
RORA Gorilla gorilla ENSGGOG00000000541 I 0.467
RORC Gorilla gorilla ENSGGOG00000002223 I 0.467
RORB Gorilla gorilla ENSGGOG00000011970 I 0.467
ENSGMOG00000000779 Gadus morhua ENSGMOG00000000779 I 0.467
ENSGMOG00000006930 Gadus morhua ENSGMOG00000006930 I 0.467
ENSLACG00000006103 Latimeria chalumnae ENSLACG00000006103 I 0.467
ENSLACG00000012803 Latimeria chalumnae ENSLACG00000012803 I 0.467
ENSLACG00000017448 Latimeria chalumnae ENSLACG00000017448 I 0.467
ENSLACG00000017778 Latimeria chalumnae ENSLACG00000017778 I 0.467
RORA Loxodonta africana ENSLAFG00000000577 I 0.467
RORB Loxodonta africana ENSLAFG00000012757 I 0.467
RORC Loxodonta africana ENSLAFG00000020960 I 0.467
ENSLOCG00000009712 Lepisosteus oculatus ENSLOCG00000009712 I 0.467
ENSLOCG00000014779 Lepisosteus oculatus ENSLOCG00000014779 I 0.467
ENSMEUG00000008146 Macropus eugenii ENSMEUG00000008146 I 0.467
ENSMEUG00000015126 Macropus eugenii ENSMEUG00000015126 I 0.467
RORA Meleagris gallopavo ENSMGAG00000004471 I 0.467
RORB Microcebus murinus ENSMICG00000007512 I 0.467
RORA Microcebus murinus ENSMICG00000010861 I 0.467
RORA Myotis lucifugus ENSMLUG00000002493 I 0.467
RORC Myotis lucifugus ENSMLUG00000029229 I 0.467
RORC Macaca mulatta ENSMMUG00000012138 I 0.467
RORB Macaca mulatta ENSMMUG00000012571 I 0.467
RORA Macaca mulatta ENSMMUG00000018192 I 0.467
RORB Monodelphis domestica ENSMODG00000002046 I 0.467
ENSMODG00000004462 Monodelphis domestica ENSMODG00000004462 I 0.467
RORA Monodelphis domestica ENSMODG00000011532 I 0.467
RORC Monodelphis domestica ENSMODG00000018911 I 0.467
ENSMPUG00000003550 Mustela putorius furo ENSMPUG00000003550 I 0.467
ENSMPUG00000008883 Mustela putorius furo ENSMPUG00000008883 I 0.467
Rorc Mus musculus ENSMUSG00000028150 D 0.467
Rora Mus musculus ENSMUSG00000032238 D 0.467
Rorb Mus musculus ENSMUSG00000036192 D 0.467
ENSNLEG00000001398 Nomascus leucogenys ENSNLEG00000001398 I 0.467
ENSNLEG00000010305 Nomascus leucogenys ENSNLEG00000010305 I 0.467
ENSNLEG00000011865 Nomascus leucogenys ENSNLEG00000011865 I 0.467
RORB Ornithorhynchus anatinus ENSOANG00000011655 I 0.467
RORA Ornithorhynchus anatinus ENSOANG00000012345 I 0.467
ENSOARG00000012659 Ovis aries ENSOARG00000012659 I 0.467
ENSOARG00000020816 Ovis aries ENSOARG00000020816 I 0.467
ENSOARG00000021060 Ovis aries ENSOARG00000021060 I 0.467
RORB Oryctolagus cuniculus ENSOCUG00000003732 I 0.467
RORA Oryctolagus cuniculus ENSOCUG00000012900 I 0.467
RORC Oryctolagus cuniculus ENSOCUG00000022907 I 0.467
RORB Otolemur garnettii ENSOGAG00000001523 I 0.467
RORA Otolemur garnettii ENSOGAG00000007357 I 0.467
RORC Otolemur garnettii ENSOGAG00000024385 I 0.467
ENSONIG00000010762 Oreochromis niloticus ENSONIG00000010762 I 0.467
ENSONIG00000015289 Oreochromis niloticus ENSONIG00000015289 I 0.467
ENSONIG00000015603 Oreochromis niloticus ENSONIG00000015603 I 0.467
RORA Ochotona princeps ENSOPRG00000012364 I 0.467
RORB Ochotona princeps ENSOPRG00000016130 I 0.467
roraa Oryzias latipes ENSORLG00000007645 I 0.467
rorb Oryzias latipes ENSORLG00000012441 I 0.467
rorcb Oryzias latipes ENSORLG00000014886 N 0.467
ENSP00000261523 Macaca fascicularis ENSP00000261523 I 0.467
ENSP00000376461 Macaca fascicularis ENSP00000376461 I 0.467
ENSP00000376461-D1 Bos grunniens ENSP00000376461-D1 I 0.467
ENSP00000379507 Macaca fascicularis ENSP00000379507 I 0.467
ENSPANG00000017172 Papio anubis ENSPANG00000017172 I 0.467
ENSPANG00000020758 Papio anubis ENSPANG00000020758 I 0.467
ENSPANG00000024927 Papio anubis ENSPANG00000024927 I 0.467
RORC Procavia capensis ENSPCAG00000005628 I 0.467
RORA Procavia capensis ENSPCAG00000006566 I 0.467
RORB Procavia capensis ENSPCAG00000012274 I 0.467
ENSPFOG00000000838 Poecilia formosa ENSPFOG00000000838 I 0.467
ENSPFOG00000003699 Poecilia formosa ENSPFOG00000003699 I 0.467
ENSPFOG00000015704 Poecilia formosa ENSPFOG00000015704 I 0.467
ENSPMAG00000009286 Petromyzon marinus ENSPMAG00000009286 I 0.467
ENSPPYG00000000853 Pongo abelii ENSPPYG00000000853 I 0.467
ENSPPYG00000006528 Pongo abelii ENSPPYG00000006528 I 0.467
ENSPPYG00000019294 Pongo abelii ENSPPYG00000019294 I 0.467
ENSPSIG00000005579 Pelodiscus sinensis ENSPSIG00000005579 I 0.467
ENSPSIG00000011314 Pelodiscus sinensis ENSPSIG00000011314 I 0.467
RORA Pan troglodytes ENSPTRG00000007134 I 0.467
RORB Pan troglodytes ENSPTRG00000021025 I 0.467
RORC Pan troglodytes ENSPTRG00000032436 I 0.467
RORB Pteropus vampyrus ENSPVAG00000007216 I 0.467
RORC Pteropus vampyrus ENSPVAG00000008917 I 0.467
RORA Pteropus vampyrus ENSPVAG00000011408 I 0.467
Rorb Rattus norvegicus ENSRNOG00000013413 I 0.467
Rorc Rattus norvegicus ENSRNOG00000020836 I 0.467
Rora Rattus norvegicus ENSRNOG00000027145 I 0.467
ENSSHAG00000002191 Sarcophilus harrisii ENSSHAG00000002191 I 0.467
ENSSHAG00000015734 Sarcophilus harrisii ENSSHAG00000015734 I 0.467
ENSSHAG00000015984 Sarcophilus harrisii ENSSHAG00000015984 I 0.467
ENSSHAG00000018693 Sarcophilus harrisii ENSSHAG00000018693 I 0.467
RORA Sus scrofa ENSSSCG00000004576 I 0.467
RORB Sus scrofa ENSSSCG00000005268 I 0.467
RORC Sus scrofa ENSSSCG00000026427 I 0.467
ENSSTOG00000012400 Ictidomys tridecemlineatus ENSSTOG00000012400 I 0.467
ENSSTOG00000013264 Ictidomys tridecemlineatus ENSSTOG00000013264 I 0.467
ENSSTOG00000019386 Ictidomys tridecemlineatus ENSSTOG00000019386 I 0.467
RORA Tupaia belangeri ENSTBEG00000003065 I 0.467
RORB Tupaia belangeri ENSTBEG00000010761 I 0.467
RORB Taeniopygia guttata ENSTGUG00000000785 I 0.467
RORA Taeniopygia guttata ENSTGUG00000005333 I 0.467
roraa Tetraodon nigroviridis ENSTNIG00000008390 I 0.467
rorb Tetraodon nigroviridis ENSTNIG00000014682 D 0.467
ENSTRUG00000002901 Takifugu rubripes ENSTRUG00000002901 I 0.467
roraa Takifugu rubripes ENSTRUG00000010553 I 0.467
ENSTSYG00000001170 Tarsius syrichta ENSTSYG00000001170 I 0.467
ENSTSYG00000007907 Tarsius syrichta ENSTSYG00000007907 I 0.467
ENSTSYG00000010455 Tarsius syrichta ENSTSYG00000010455 I 0.467
RORC Tursiops truncatus ENSTTRG00000003151 I 0.467
RORA Tursiops truncatus ENSTTRG00000007718 I 0.467
RORB Vicugna pacos ENSVPAG00000003390 I 0.467
RORA Vicugna pacos ENSVPAG00000007893 I 0.467
ENSXMAG00000003228 Xiphophorus maculatus ENSXMAG00000003228 I 0.467
ENSXMAG00000015567 Xiphophorus maculatus ENSXMAG00000015567 I 0.467
ENSXMAG00000018442 Xiphophorus maculatus ENSXMAG00000018442 I 0.467
Gfo_R008263 Geospiza fortis Gfo_R008263 I 0.467
Gfo_R008829 Geospiza fortis Gfo_R008829 I 0.467
gw.311.78.1 Branchiostoma floridae gw.311.78.1 I 0.467
Myotis_brandtii_RORA_10029423 Myotis brandtii Myotis_brandtii_RORA_10029423 I 0.467
Myotis_brandtii_RORB_10034418 Myotis brandtii Myotis_brandtii_RORB_10034418 I 0.467
Myotis_brandtii_RORC_10008053 Myotis brandtii Myotis_brandtii_RORC_10008053 I 0.467
Pvit_17369 Pogona vitticeps Pvit_17369 I 0.467
Pvit_17370 Pogona vitticeps Pvit_17370 I 0.467
Tal_R010110 Tyto alba Tal_R010110 I 0.467
rora Xenopus tropicalis XB-GENE-478535 I 0.467
rorb Xenopus tropicalis XB-GENE-484846 I 0.467
XP_002937524 Xenopus tropicalis XP_002937524 I 0.467