CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L798_09225
(
Zootermopsis nevadensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
L798_09225
T305666_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
usp
M03934_2.00
Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT
SELEX
Nitta et al.(2015)
usp_1
0.991
0.914
usp
M06426_2.00
Drosophila melanogaster
HRRGGTCAH
DTGACCYYD
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
0.991
0.914
usp
M02709_2.00
Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC
SELEX
Mathelier et al.(2014)
MA0016.1
0.991
0.914
usp
M09689_2.00
Drosophila melanogaster
KRGGTCACG
CGTGACCYM
Misc
Kulakovskiy et al.(2009)
usp
0.991
0.914
usp
M11191_2.00
Drosophila melanogaster
GRGGTCAYS
SRTGACCYC
Transfac
Matys et al.(2006)
I$CF1_01
0.991
0.914
usp
M11192_2.00
Drosophila melanogaster
GGGGTCAYS
SRTGACCCC
Transfac
Matys et al.(2006)
I$CF1_02
0.991
0.914
Rxra
M00181_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Badis et al.(2009)
Rxra_1035
0.990
0.857
RXRA
M03408_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_1
0.990
0.857
RXRA
M03409_2.00
Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_2
0.990
0.857
RXRA
M03410_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_3
0.990
0.857
RXRA
M03411_2.00
Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_4
0.990
0.857
Rxra
M03421_2.00
Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Rxra_1
0.990
0.857
Rxra
M03422_2.00
Mus musculus
RGGTCATGACCY
RGGTCATGACCY
SELEX
Jolma et al.(2013)
Rxra_2
0.990
0.857
RXRA
M05671_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
0.990
0.857
RXRA
M05882_2.00
Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB
SMiLE-seq
Isakova et al.(2017)
RXRa
0.990
0.857
RXRA
M07993_2.00
Homo sapiens
NRRGGTCA
TGACCYYN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
0.990
0.857
RXRA
M07994_2.00
Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
0.990
0.857
RXRA
M09294_2.00
Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
0.990
0.857
Rxra
M09306_2.00
Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
0.990
0.857
RXRA
M11182_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RXRA_07
0.990
0.857
RXRA
M05672_2.00
Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
0.990
0.857
Rxrb
M02402_2.00
Mus musculus
VRGGTCAH
DTGACCYB
PBM
Weirauch et al.(2014)
pTH2861
0.990
0.829
RXRB
M03415_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRB_1
0.990
0.829
Rxrb
M03435_2.00
Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
Rxrb_1
0.990
0.829
RXRB
M05681_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1
0.990
0.829
RXRB
M05682_2.00
Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2
0.990
0.829
RXRB
M09297_2.00
Homo sapiens
DSAGGTCASD
HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C
0.990
0.829
Rxrb
M09330_2.00
Mus musculus
DSAGGTCASD
HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C
0.990
0.829
RXRB
M05683_2.00
Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1
0.990
0.829
RXRB
M05684_2.00
Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2
0.990
0.829
Rxrg
M02400_2.00
Mus musculus
VRGGTCAN
NTGACCYB
PBM
Weirauch et al.(2014)
pTH2880
0.989
0.843
RXRG
M03375_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRG_1
0.989
0.843
RXRG
M03376_2.00
Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRG_2
0.989
0.843
RXRG
M03377_2.00
Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
RXRG_3
0.989
0.843
RXRG
M03378_2.00
Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN
SELEX
Jolma et al.(2013)
RXRG_4
0.989
0.843
RXRG
M02746_2.00
Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC
SELEX
Jolma et al.(2010)
RXRG_dimer
0.989
0.843
RXRG
M05615_2.00
Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
0.989
0.843
RXRG
M05616_2.00
Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
0.989
0.843
RXRG
M05879_2.00
Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY
SMiLE-seq
Isakova et al.(2017)
RXRg
0.989
0.843
RXRG
M09280_2.00
Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
0.989
0.843
Rxrg
M09305_2.00
Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
0.989
0.843
RXRG
M05617_2.00
Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
0.989
0.843
RXRG
M05618_2.00
Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
0.989
0.843
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.961
0.586
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.961
0.586
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.961
0.586
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN
NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.946
0.629
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.944
0.571
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.944
0.571
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.944
0.571
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.944
0.571
Hr78
M06430_2.00
Drosophila melanogaster
HVAGGTCA
TGACCTBD
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
0.942
0.643
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.941
0.629
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.941
0.629
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.941
0.629
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN
NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.941
0.629
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.941
0.629
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.941
0.629
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN
NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.941
0.629
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.941
0.629
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN
NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.937
0.614
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN
NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.937
0.614
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA
TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.937
0.614
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB
VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.937
0.614
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.937
0.614
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.937
0.614
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.937
0.614
NR2F2
M11181_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.937
0.614
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR
YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.936
0.571
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.936
0.571
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.936
0.571
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.936
0.571
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.936
0.571
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.936
0.571
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.936
0.571
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.936
0.571
NR2F6
M11153_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.936
0.571
NR2F6
M11154_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.936
0.571
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.936
0.571
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.936
0.571
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.936
0.571
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.936
0.571
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN
NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.933
0.600
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN
NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.933
0.600
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.933
0.600
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.933
0.600
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN
NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.933
0.600
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.933
0.600
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.933
0.600
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.933
0.600
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.933
0.600
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.933
0.600
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.933
0.600
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA
TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.933
0.600
NR2F1
M11172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.933
0.600
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.933
0.600
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.933
0.600
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.933
0.600
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.933
0.600
NR2C2
M03407_2.00
Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB
SELEX
Jolma et al.(2013)
NR2C2_1
0.933
0.643
NR2C2
M05669_2.00
Homo sapiens
NRGGTCRN
NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
0.933
0.643
NR2C2
M08156_2.00
Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN
ChIP-seq
Mathelier et al.(2014)
MA0504.1
0.933
0.643
NR2C2
M07990_2.00
Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
0.933
0.643
NR2C2
M07991_2.00
Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
0.933
0.643
NR2C2
M07992_2.00
Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
0.933
0.643
NR2C2
M08221_2.00
Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH
ChIP-seq
Contrino et al.(2012)
Mv97
0.933
0.643
NR2C2
M08222_2.00
Homo sapiens
TCARAGGTCA
TGACCTYTGA
ChIP-seq
Contrino et al.(2012)
Mv98
0.933
0.643
NR2C2
M09292_2.00
Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
0.933
0.643
Nr2c2
M09303_2.00
Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
0.933
0.643
NR2C2
M09611_2.00
Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
0.933
0.643
NR2C2
M11173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_03
0.933
0.643
NR2C2
M11174_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_04
0.933
0.643
NR2C2
M11175_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_01
0.933
0.643
NR2C2
M11176_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_03
0.933
0.643
NR2C2
M11177_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2_01
0.933
0.643
NR2C2
M11178_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2
0.933
0.643
NR2C2
M11179_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q3
0.933
0.643
NR2C2
M05670_2.00
Homo sapiens
NRGGTCRN
NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
0.933
0.643
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH
DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.932
0.543
RARG
M02397_2.00
Homo sapiens
VGGTCANN
NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.932
0.586
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN
NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.932
0.586
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.932
0.586
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.932
0.586
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.932
0.586
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.932
0.586
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.932
0.586
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.932
0.586
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.932
0.586
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.932
0.586
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.932
0.586
RARG
M05653_2.00
Homo sapiens
NRGGTCANV
BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.932
0.586
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.932
0.586
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.932
0.586
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.932
0.586
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.932
0.586
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.932
0.586
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.932
0.586
RARG
M11167_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.932
0.586
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV
BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.932
0.586
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.932
0.586
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.932
0.586
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA
TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.930
0.614
PPARA
M09295_2.00
Homo sapiens
NWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWN
Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B
0.929
0.571
Ppara
M09314_2.00
Mus musculus
HWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWD
Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A
0.929
0.571
PPARA
M11183_2.00
Homo sapiens
CWRAWCYAGGNCAWAGKTCA
TGAMCTWTGNCCTRGWTYWG
Transfac
Matys et al.(2006)
V$PPARA_01
0.929
0.571
PPARA
M11184_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARA_Q6
0.929
0.571
CBG17178
M02392_2.00
Caenorhabditis briggsae
RAGGTCAH
DTGACCTY
PBM
Weirauch et al.(2014)
pTH6634
0.928
0.557
Pparg
M05884_2.00
Mus musculus
HWNTRGGKYANB
VNTRMCCYANWD
SMiLE-seq
Isakova et al.(2017)
PPARg
0.928
0.571
PPARG
M02707_2.00
Homo sapiens
STRGGTCANNDTGACCYANW
WNTRGGTCAHNNTGACCYAS
SELEX
Mathelier et al.(2014)
MA0066.1
0.928
0.571
PPARG
M09278_2.00
Homo sapiens
VWSKRGGKSARAGGKSA
TSMCCTYTSMCCYMSWB
Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A
0.928
0.571
Pparg
M09299_2.00
Mus musculus
HWBTRGGBSARAGGKNA
TNMCCTYTSVCCYAVWD
Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A
0.928
0.571
Pparg
M09612_2.00
Mus musculus
TRGGNCARAGGKCA
TGMCCTYTGNCCYA
Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511
0.928
0.571
PPARG
M11138_2.00
Homo sapiens
NNDRRGGTCAAAGGTCAHVND
HNBDTGACCTTTGACCYYHNN
Transfac
Matys et al.(2006)
V$PPARG_01
0.928
0.571
PPARG
M11139_2.00
Homo sapiens
AWBTRGGTCACNDTGACCTASTT
AASTAGGTCAHNGTGACCYAVWT
Transfac
Matys et al.(2006)
V$PPARG_02
0.928
0.571
PPARG
M11140_2.00
Homo sapiens
WWBHRGGNYAAAGKTCA
TGAMCTTTRNCCYDVWW
Transfac
Matys et al.(2006)
V$PPARG_03
0.928
0.571
PPARG
M11141_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARG_Q6
0.928
0.571
O77476_BRUPA
M02422_2.00
Brugia pahangi
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6019
0.925
0.629
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR
YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.924
0.557
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.924
0.557
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.924
0.557
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.924
0.557
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.924
0.557
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA
TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.921
0.571
Eip75B
M03928_2.00
Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK
SELEX
Nitta et al.(2015)
Eip75B_1
0.919
0.557
Eip75B
M03929_2.00
Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT
SELEX
Nitta et al.(2015)
Eip75B_2
0.919
0.557
Eip75B
M06416_2.00
Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
0.919
0.557
Rarb
M02401_2.00
Mus musculus
NRRGGTCAHN
NDTGACCYYN
PBM
Weirauch et al.(2014)
pTH2804
0.918
0.571
Rara
M00185_2.00
Mus musculus
NRGGTCAN
NTGACCYN
PBM
Badis et al.(2009)
Rara_1051
0.918
0.571
RARA
M03369_2.00
Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY
SELEX
Jolma et al.(2013)
RARA_1
0.918
0.571
RARA
M03370_2.00
Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
RARA_2
0.918
0.571
RARA
M03371_2.00
Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT
SELEX
Jolma et al.(2013)
RARA_3
0.918
0.571
RARA
M03372_2.00
Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT
SELEX
Jolma et al.(2013)
RARA_4
0.918
0.571
RARA
M03373_2.00
Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW
SELEX
Jolma et al.(2013)
RARA_5
0.918
0.571
RARA
M03374_2.00
Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT
SELEX
Jolma et al.(2013)
RARA_6
0.918
0.571
RARB
M03355_2.00
Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT
SELEX
Jolma et al.(2013)
RARB_1
0.918
0.571
Rara
M03432_2.00
Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT
SELEX
Jolma et al.(2013)
Rara_1
0.918
0.571
Rara
M03433_2.00
Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT
SELEX
Jolma et al.(2013)
Rara_2
0.918
0.571
Rara
M03434_2.00
Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
Rara_3
0.918
0.571
Rarb
M03423_2.00
Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW
SELEX
Jolma et al.(2013)
Rarb_1
0.918
0.571
Rarb
M03424_2.00
Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY
SELEX
Jolma et al.(2013)
Rarb_2
0.918
0.571
Rarb
M03425_2.00
Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT
SELEX
Jolma et al.(2013)
Rarb_3
0.918
0.571
RARA
M05607_2.00
Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
0.918
0.571
RARA
M05608_2.00
Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
0.918
0.571
RARA
M05609_2.00
Homo sapiens
NRRGGTCANV
BNTGACCYYN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
0.918
0.571
RARB
M05563_2.00
Homo sapiens
NHAAGGTCAN
NTGACCTTDN
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
0.918
0.571
RARB
M05564_2.00
Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
0.918
0.571
RARB
M05565_2.00
Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
0.918
0.571
RARA
M05878_2.00
Homo sapiens
RAGGTCA
TGACCTY
SMiLE-seq
Isakova et al.(2017)
RARa
0.918
0.571
RARA
M09277_2.00
Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
0.918
0.571
Rara
M09329_2.00
Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
0.918
0.571
RARA
M11137_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B1_Q6
0.918
0.571
RARB
M11094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B2_Q6
0.918
0.571
RARA
M05610_2.00
Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
0.918
0.571
RARA
M05611_2.00
Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
0.918
0.571
RARA
M05612_2.00
Homo sapiens
NRAGGTCANN
NNTGACCTYN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
0.918
0.571
RARB
M05566_2.00
Homo sapiens
NHRAGGTCAH
DTGACCTYDN
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
0.918
0.571
RARB
M05567_2.00
Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
0.918
0.571
RARB
M05568_2.00
Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
0.918
0.571
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.912
0.586
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.912
0.586
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.912
0.586
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.912
0.586
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.912
0.586
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.912
0.586
Q969A9_BOMMO
M02410_2.00
Bombyx mori
VRGGTCDN
NHGACCYB
PBM
Weirauch et al.(2014)
pTH5516
0.908
0.586
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.907
0.571
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA
TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.907
0.571
Rorb
M00820_2.00
Mus musculus
NRGGTCANN
NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.906
0.586
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.906
0.586
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.906
0.586
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.906
0.586
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.906
0.586
RORB
M11187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.906
0.586
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.906
0.586
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.906
0.586
Rora
M00819_2.00
Mus musculus
NNRGGTCA
TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.905
0.586
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.905
0.586
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.905
0.586
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA
TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.905
0.586
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.905
0.586
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.905
0.586
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.905
0.586
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.905
0.586
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.905
0.586
RORA
M11092_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.905
0.586
RORA
M11093_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.905
0.586
RORC
M02405_2.00
Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6612
0.901
0.586
Q95WG3_ACRMI
M02424_2.00
Acropora millepora
NRAGGTCAN
NTGACCTYN
PBM
Weirauch et al.(2014)
pTH6144
0.899
0.586
NR4A1
M05601_2.00
Homo sapiens
NAAAGGTCAN
NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1
0.892
0.614
NR4A1
M05602_2.00
Homo sapiens
NAAAGGTCAN
NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2
0.892
0.614
NR4A1
M08153_2.00
Homo sapiens
NAAAGGTCAN
NTGACCTTTN
ChIP-seq
Mathelier et al.(2014)
MA1112.1
0.892
0.614
NR4A1
M09274_2.00
Homo sapiens
AAAKGBCAN
NTGVCMTTT
Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A
0.892
0.614
Nr4a1
M09317_2.00
Mus musculus
NRAADGKCA
TGMCHTTYN
Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B
0.892
0.614
NR4A1
M09608_2.00
Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN
Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363
0.892
0.614
NR4A1
M11132_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_01
0.892
0.614
NR4A1
M11133_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_02
0.892
0.614
NR4A1
M11134_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5
0.892
0.614
NR4A1
M05603_2.00
Homo sapiens
NAAAGGTCRN
NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1
0.892
0.614
NR4A1
M05604_2.00
Homo sapiens
NAAAGGTCRN
NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2
0.892
0.614
NR5A2
M05589_2.00
Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1
0.879
0.614
NR5A2
M05590_2.00
Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2
0.879
0.614
NR5A2
M05591_2.00
Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3
0.879
0.614
NR5A2
M09271_2.00
Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B
0.879
0.614
NR5A2
M11126_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5_01
0.879
0.614
NR5A2
M11127_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5
0.879
0.614
NR5A2
M11128_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q6
0.879
0.614
NR5A2
M05592_2.00
Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1
0.879
0.614
NR5A2
M05593_2.00
Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2
0.879
0.614
NR5A2
M05594_2.00
Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3
0.879
0.614
NR6A1
M05627_2.00
Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN
SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX
0.874
0.629
NR6A1
M09284_2.00
Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT
Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B
0.874
0.629
NR6A1
M11148_2.00
Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN
Transfac
Matys et al.(2006)
V$GCNF_01
0.874
0.629
NR6A1
M11149_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCNF_Q3
0.874
0.629
NR6A1
M05628_2.00
Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN
SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX
0.874
0.629
Hr4
M06435_2.00
Drosophila melanogaster
AAGGTCA
TGACCTT
B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546
0.872
0.571
Nr4a2
M00818_2.00
Mus musculus
AAAGGTCA
TGACCTTT
PBM
Weirauch et al.(2013)
pTH3467
0.869
0.643
NR4A2
M03383_2.00
Homo sapiens
AGGTCAHNNNDTGACCT
AGGTCAHNNNDTGACCT
SELEX
Jolma et al.(2013)
NR4A2_1
0.869
0.643
NR4A2
M03384_2.00
Homo sapiens
TGACCTTTAAAGGTCA
TGACCTTTAAAGGTCA
SELEX
Jolma et al.(2013)
NR4A2_2
0.869
0.643
NR4A2
M03385_2.00
Homo sapiens
NBTAAAGGTCA
TGACCTTTAVN
SELEX
Jolma et al.(2013)
NR4A2_3
0.869
0.643
NR4A2
M05639_2.00
Homo sapiens
NWAAKGTCAN
NTGACMTTWN
SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX
0.869
0.643
NR4A2
M05881_2.00
Homo sapiens
NAAAKGTYA
TRACMTTTN
SMiLE-seq
Isakova et al.(2017)
NR4A2
0.869
0.643
NR4A2
M09286_2.00
Homo sapiens
RAAGGTCAV
BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C
0.869
0.643
Nr4a2
M09323_2.00
Mus musculus
RAAGGTCAV
BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C
0.869
0.643
NR4A2
M11151_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3_01
0.869
0.643
NR4A2
M11152_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3
0.869
0.643
NR4A2
M08461_2.00
Homo sapiens
RAGGTCAM
KTGACCTY
COMPILED
Mathelier et al.(2014)
MA0160.1
0.869
0.643
NR4A2
M05640_2.00
Homo sapiens
NAAAGGTCRN
NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX
0.869
0.643
Nr5a2
M00816_2.00
Mus musculus
VAAGGTCR
YGACCTTB
PBM
Weirauch et al.(2013)
pTH3468
0.863
0.586
Nr5a2
M08158_2.00
Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB
ChIP-seq
Mathelier et al.(2014)
MA0505.1
0.863
0.586
Nr5a2
M09320_2.00
Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A
0.863
0.586
Nr5a2
M09616_2.00
Mus musculus
BYCAAGGYCA
TGRCCTTGRV
Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295
0.863
0.586
Nr5a2
M09615_2.00
Mus musculus
BYCAAGGYCA
TGRCCTTGRV
Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019
0.863
0.586
nhr-6
M01298_2.00
Caenorhabditis elegans
AAAKGTCA
TGACMTTT
PBM
Lambert et al.(2019)
pTH9944
0.847
0.614
ftz-f1
M02407_2.00
Drosophila melanogaster
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH5709
0.836
0.586
ftz-f1
M06417_2.00
Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
0.836
0.586
ftz-f1
M06418_2.00
Drosophila melanogaster
AAGGTCA
TGACCTT
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
0.836
0.586
NR5A1
M05613_2.00
Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN
SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX
0.831
0.571
Nr5a1
M09322_2.00
Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B
0.831
0.571
NR5A1
M11142_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5_01
0.831
0.571
NR5A1
M11143_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5
0.831
0.571
NR5A1
M11144_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6_01
0.831
0.571
NR5A1
M11145_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6
0.831
0.571
NR5A1
M05614_2.00
Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN
SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX
0.831
0.571
Hr38
M03939_2.00
Drosophila melanogaster
NAAAGGTCA
TGACCTTTN
SELEX
Nitta et al.(2015)
Hr38_1
0.814
0.643
nhr-25
M08226_2.00
Caenorhabditis elegans
MAAGGTCA
TGACCTTK
ChIP-seq
Contrino et al.(2012)
Mw160
0.793
0.557
THRA
M03368_2.00
Homo sapiens
DTGACCTYATVAGGTCAH
DTGACCTBATRAGGTCAH
SELEX
Jolma et al.(2013)
THRA_1
0.779
0.529
THRA
M09275_2.00
Homo sapiens
RGKWSDNNYVAGGWSAN
NTSWCCTBRNNHSWMCY
Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C
0.779
0.529
Thra
M09333_2.00
Mus musculus
VRGGKCANNYVRGGHCA
TGDCCYBRNNTGMCCYB
Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C
0.779
0.529
Thra
M09619_2.00
Mus musculus
GGKCANNYVRGGHCA
TGDCCYBRNNTGMCC
Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347
0.779
0.529
THRA
M11135_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RALPHA_Q6
0.779
0.529
GAG_AVIER
M11193_2.00
Avian erythroblastosis virus
VHNTRAGGTCACSSNN
NNSSGTGACCTYANDB
Transfac
Matys et al.(2006)
V$T3R_01
0.774
0.514
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.774
0.514
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN
NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.764
0.529
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH
DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.764
0.529
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH
DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.764
0.529
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.764
0.529
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN
NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.764
0.529
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.764
0.529
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH
DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.764
0.529
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA
TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.764
0.529
THRB
M11150_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.764
0.529
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN
NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.764
0.529
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN
NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.764
0.529
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.764
0.529
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH
DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.764
0.529
ERR
M03941_2.00
Drosophila melanogaster
BSAAGGTCRH
DYGACCTTSV
SELEX
Nitta et al.(2015)
ERR_1
0.762
0.571
ERR
M06433_2.00
Drosophila melanogaster
MAAGGTCA
TGACCTTK
B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849
0.762
0.571
Hnf4
M03935_2.00
Drosophila melanogaster
RGGKCAAAGGTCA
TGACCTTTGMCCY
SELEX
Nitta et al.(2015)
Hnf4_1
0.752
0.600
Hnf4
M03936_2.00
Drosophila melanogaster
RGGKCAAAGTYCA
TGRACTTTGMCCY
SELEX
Nitta et al.(2015)
Hnf4_2
0.752
0.600
Hnf4
M03937_2.00
Drosophila melanogaster
RGTVCAAAGKTCR
YGAMCTTTGBACY
SELEX
Nitta et al.(2015)
Hnf4_3
0.752
0.600
Hnf4
M03938_2.00
Drosophila melanogaster
RTGRACTTTGGACY
RGTCCAAAGTYCAY
SELEX
Nitta et al.(2015)
Hnf4_4
0.752
0.600
Hnf4
M06428_2.00
Drosophila melanogaster
DKNKWSSNGGGGTCA
TGACCCCNSSWMNMH
B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914
0.752
0.600
Hnf4
M06429_2.00
Drosophila melanogaster
GGGGTCAH
DTGACCCC
B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914
0.752
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDR16916
Nuclear receptor
77
146
HLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDKRQRNRCQYCRYQKCLGMGMKR
Links
Other
Nuclear receptor
family TFs
Other
Zootermopsis nevadensis
TFs
2983 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy