CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG77665
(
Lottia gigantea
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
LotgiG77665
T305741_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP77665
Nuclear receptor
1
69
CDVCGDKAAGFYCGAFVCEACKKFFIRAAKQGEVKYKCLRDGNCTITKVNRIQCQFCRYQKCVALNMFC
LotgiP77665
Nuclear receptor
82
151
IACQVCGAQSSGFHFGALTCEGCKGFFRRMAKERSSNSYICSKGNMCLVSISTRNSCKACRYQKCILVGM
Links
Other
Nuclear receptor
family TFs
Other
Lottia gigantea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_03920
Colletotrichum fioriniae
CFIO01_03920
N
CGGC5_250
Colletotrichum gloeosporioides
CGGC5_250
N
CH063_15268
Colletotrichum higginsianum
CH063_15268
N
Cob_02475
Colletotrichum orbiculare
Cob_02475
N
fgenesh1_pg.sca_60_chr3_6_0000027
Nectria haematococca
fgenesh1_pg.sca_60_chr3_6_0000027
N
VDBG_06470
Verticillium albo atrum
VDBG_06470
N
VDBG_06470
Verticillium alfalfae
VDBG_06470
N