CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_012530
(
Schistosoma mansoni
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
Smp_012530
T306009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_012530.1:pep
Nuclear receptor
15
68
RACLLCGLVKTLNQFQLNGCENCEDFLKMQGDREKVYECSSANFDGLLAMMSPN
Links
Other
Nuclear receptor
family TFs
Other
Schistosoma mansoni
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00013p00046610
Amborella trichopoda
AMTR_s00013p00046610
N
BGIOSGA035306
Oryza indica
BGIOSGA035306
N
GSMUA_Achr6G16600_001
Musa acuminata
GSMUA_Achr6G16600_001
N
OBART11G14300
Oryza barthii
OBART11G14300
N
OGLUM11G13870
Oryza glumaepatula
OGLUM11G13870
N
OLONG_002987
Oryza longistaminata
OLONG_002987
N
OMERI11G11960
Oryza meridionalis
OMERI11G11960
N
ORGLA11G0122000
Oryza glaberrima
ORGLA11G0122000
N
PGSC0003DMG400020210
Solanum tuberosum
PGSC0003DMG400020210
N
Solyc02g094170.2
Solanum lycopersicum
Solyc02g094170.2
N
Traes_3DS_4F293F5BA
Triticum aestivum
Traes_3DS_4F293F5BA
N
VIT_14s0068g01930
Vitis vinifera
VIT_14s0068g01930
N