CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-122
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003712
T306234_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-122
M00696_2.00
Caenorhabditis elegans
NDTGGAGTVN
NBACTCCAHN
PBM
Narasimhan et al.(2015)
pTH9326
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.745
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00696_2.00
Nuclear receptor
6
78
EPCKICNSPGNGLHFGINACRGCTSFFRRTIVQEKEYYCNSDDSCEIGKSEAALKSPCRKCRFAKCLEVGMKS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y41D4B.9
Nuclear receptor
6
78
EPCKICNSPGNGLHFGINACRGCTSFFRRTIVQEKEYYCNSDDSCEIGKSEAALKSPCRKCRFAKCLEVGMKS
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R004902
Calypte anna
Aan_R004902
I
Aan_R013230
Calypte anna
Aan_R013230
I
AATE006511
Anopheles atroparvus
AATE006511
I
Afo_R002997
Aptenodytes forsteri
Afo_R002997
I
Afo_R007951
Aptenodytes forsteri
Afo_R007951
I
Alligator_sinensis_CCG007983.1
Alligator sinensis
Alligator_sinensis_CCG007983.1
I
Alligator_sinensis_CCG020587.1
Alligator sinensis
Alligator_sinensis_CCG020587.1
I
BGIBMGA003874
Bombyx mori
BGIBMGA003874
I
Brh_R008067
Buceros rhinoceros
Brh_R008067
I
Brh_R010854
Buceros rhinoceros
Brh_R010854
I
CGI_10008414
Crassostrea gigas
CGI_10008414
I
Cmyd_10013489
Chelonia mydas
Cmyd_10013489
I
TEF
Anolis carolinensis
ENSACAG00000004810
I
HLF
Anolis carolinensis
ENSACAG00000017417
I
ENSAMEG00000002146
Ailuropoda melanoleuca
ENSAMEG00000002146
I
ENSAMEG00000014714
Ailuropoda melanoleuca
ENSAMEG00000014714
I
ENSAMXG00000008798
Astyanax mexicanus
ENSAMXG00000008798
I
ENSAMXG00000009417
Astyanax mexicanus
ENSAMXG00000009417
I
ENSAMXG00000015442
Astyanax mexicanus
ENSAMXG00000015442
I
ENSAMXG00000016053
Astyanax mexicanus
ENSAMXG00000016053
I
ENSAMXG00000017639
Astyanax mexicanus
ENSAMXG00000017639
I
ENSAPLG00000004386
Anas platyrhynchos
ENSAPLG00000004386
I
ENSAPLG00000005838
Anas platyrhynchos
ENSAPLG00000005838
I
HLF
Bos taurus
ENSBTAG00000006618
I
TEF
Bos taurus
ENSBTAG00000016580
I
ENSBTAP00000008682-D1
Bos grunniens
ENSBTAP00000008682-D1
I
ENSBTAP00000022056-D1
Bos grunniens
ENSBTAP00000022056-D1
I
TEF
Canis familiaris
ENSCAFG00000001095
I
HLF
Canis familiaris
ENSCAFG00000030851
I
ENSCHOG00000001396
Choloepus hoffmanni
ENSCHOG00000001396
I
TEF
Choloepus hoffmanni
ENSCHOG00000009442
I
TEF
Callithrix jacchus
ENSCJAG00000004977
I
HLF
Callithrix jacchus
ENSCJAG00000011298
I
ENSCPOG00000011000
Cavia porcellus
ENSCPOG00000011000
I
TEF
Cavia porcellus
ENSCPOG00000020591
I
ENSCSAG00000005557
Chlorocebus sabaeus
ENSCSAG00000005557
I
ENSCSAG00000005816
Chlorocebus sabaeus
ENSCSAG00000005816
I
tefa
Danio rerio
ENSDARG00000039117
I
hlfb
Danio rerio
ENSDARG00000061011
I
dbpa
Danio rerio
ENSDARG00000063014
I
hlfa
Danio rerio
ENSDARG00000074752
I
tefb
Danio rerio
ENSDARG00000098103
I
TEF
Dasypus novemcinctus
ENSDNOG00000035257
I
ENSDORG00000012644
Dipodomys ordii
ENSDORG00000012644
I
Tef
Dipodomys ordii
ENSDORG00000014982
I
HLF
Equus caballus
ENSECAG00000016953
I
TEF
Equus caballus
ENSECAG00000018137
I
HLF
Erinaceus europaeus
ENSEEUG00000010964
I
HLF
Echinops telfairi
ENSETEG00000017670
I
ENSFALG00000002265
Ficedula albicollis
ENSFALG00000002265
I
TEF
Felis catus
ENSFCAG00000003674
I
HLF
Felis catus
ENSFCAG00000022556
I
HLF
Homo sapiens
ENSG00000108924
D
TEF
Homo sapiens
ENSG00000167074
D
tefa
Gasterosteus aculeatus
ENSGACG00000004793
I
tefb
Gasterosteus aculeatus
ENSGACG00000007628
I
hlfb
Gasterosteus aculeatus
ENSGACG00000010103
I
HLF
Gallus gallus
ENSGALG00000003059
I
TEF
Gallus gallus
ENSGALG00000011958
I
HLF
Gorilla gorilla
ENSGGOG00000006075
I
TEF
Gorilla gorilla
ENSGGOG00000016460
I
ENSGMOG00000004830
Gadus morhua
ENSGMOG00000004830
I
ENSGMOG00000013327
Gadus morhua
ENSGMOG00000013327
I
ENSGMOG00000014488
Gadus morhua
ENSGMOG00000014488
I
ENSLACG00000012701
Latimeria chalumnae
ENSLACG00000012701
I
ENSLACG00000012726
Latimeria chalumnae
ENSLACG00000012726
I
TEF
Loxodonta africana
ENSLAFG00000013151
I
HLF
Loxodonta africana
ENSLAFG00000016475
I
ENSLOCG00000011595
Lepisosteus oculatus
ENSLOCG00000011595
I
ENSLOCG00000012233
Lepisosteus oculatus
ENSLOCG00000012233
I
ENSMEUG00000013604
Macropus eugenii
ENSMEUG00000013604
I
ENSMEUG00000016384
Macropus eugenii
ENSMEUG00000016384
I
TEF
Meleagris gallopavo
ENSMGAG00000012262
I
ENSMICG00000002860
Microcebus murinus
ENSMICG00000002860
I
ENSMICG00000013518
Microcebus murinus
ENSMICG00000013518
I
TEF
Myotis lucifugus
ENSMLUG00000002459
I
HLF
Myotis lucifugus
ENSMLUG00000007393
I
TEF
Macaca mulatta
ENSMMUG00000005221
I
HLF
Macaca mulatta
ENSMMUG00000022627
I
HLF
Monodelphis domestica
ENSMODG00000014851
I
TEF
Monodelphis domestica
ENSMODG00000016547
I
ENSMPUG00000015400
Mustela putorius furo
ENSMPUG00000015400
I
ENSMPUG00000016407
Mustela putorius furo
ENSMPUG00000016407
I
Hlf
Mus musculus
ENSMUSG00000003949
D
Tef
Mus musculus
ENSMUSG00000022389
D
ENSNLEG00000007993
Nomascus leucogenys
ENSNLEG00000007993
I
ENSNLEG00000015473
Nomascus leucogenys
ENSNLEG00000015473
I
HLF
Ornithorhynchus anatinus
ENSOANG00000010288
I
TEF
Ornithorhynchus anatinus
ENSOANG00000011535
I
ENSOARG00000018238
Ovis aries
ENSOARG00000018238
I
HLF
Oryctolagus cuniculus
ENSOCUG00000010547
I
TEF
Oryctolagus cuniculus
ENSOCUG00000012866
I
HLF
Otolemur garnettii
ENSOGAG00000007056
I
TEF
Otolemur garnettii
ENSOGAG00000025997
I
ENSONIG00000007041
Oreochromis niloticus
ENSONIG00000007041
I
ENSONIG00000008480
Oreochromis niloticus
ENSONIG00000008480
I
ENSONIG00000009563
Oreochromis niloticus
ENSONIG00000009563
I
ENSONIG00000012778
Oreochromis niloticus
ENSONIG00000012778
I
ENSONIG00000019079
Oreochromis niloticus
ENSONIG00000019079
I
ENSONIG00000019694
Oreochromis niloticus
ENSONIG00000019694
I
HLF
Ochotona princeps
ENSOPRG00000004195
I
TEF
Ochotona princeps
ENSOPRG00000013592
I
hlfa
Oryzias latipes
ENSORLG00000000969
I
tefa
Oryzias latipes
ENSORLG00000002582
I
ENSORLG00000011412
Oryzias latipes
ENSORLG00000011412
I
tefb
Oryzias latipes
ENSORLG00000014144
I
ENSP00000226067
Macaca fascicularis
ENSP00000226067
I
ENSP00000403078
Macaca fascicularis
ENSP00000403078
I
ENSPANG00000022360
Papio anubis
ENSPANG00000022360
I
ENSPANG00000024579
Papio anubis
ENSPANG00000024579
I
ENSPFOG00000004560
Poecilia formosa
ENSPFOG00000004560
I
ENSPFOG00000007430
Poecilia formosa
ENSPFOG00000007430
I
ENSPFOG00000010189
Poecilia formosa
ENSPFOG00000010189
I
ENSPFOG00000013950
Poecilia formosa
ENSPFOG00000013950
I
ENSPFOG00000016821
Poecilia formosa
ENSPFOG00000016821
I
ENSPFOG00000018222
Poecilia formosa
ENSPFOG00000018222
I
ENSPPYG00000008257
Pongo abelii
ENSPPYG00000008257
I
ENSPPYG00000011867
Pongo abelii
ENSPPYG00000011867
I
ENSPSIG00000006835
Pelodiscus sinensis
ENSPSIG00000006835
I
ENSPSIG00000016356
Pelodiscus sinensis
ENSPSIG00000016356
I
HLF
Pan troglodytes
ENSPTRG00000009424
I
TEF
Pan troglodytes
ENSPTRG00000014425
I
TEF
Pteropus vampyrus
ENSPVAG00000001160
I
HLF
Pteropus vampyrus
ENSPVAG00000007461
I
Hlf
Rattus norvegicus
ENSRNOG00000002456
I
Tef
Rattus norvegicus
ENSRNOG00000019383
I
TEF
Sorex araneus
ENSSARG00000003323
I
ENSSARG00000013841
Sorex araneus
ENSSARG00000013841
I
ENSSHAG00000009361
Sarcophilus harrisii
ENSSHAG00000009361
I
ENSSHAG00000015304
Sarcophilus harrisii
ENSSHAG00000015304
I
ENSSTOG00000019642
Ictidomys tridecemlineatus
ENSSTOG00000019642
I
ENSSTOG00000029018
Ictidomys tridecemlineatus
ENSSTOG00000029018
I
HLF
Tupaia belangeri
ENSTBEG00000006958
I
TEF
Tupaia belangeri
ENSTBEG00000010576
I
HLF
Taeniopygia guttata
ENSTGUG00000009478
I
TEF
Taeniopygia guttata
ENSTGUG00000009944
I
ENSTNIG00000002167
Tetraodon nigroviridis
ENSTNIG00000002167
I
ENSTNIG00000003545
Tetraodon nigroviridis
ENSTNIG00000003545
I
ENSTNIG00000004400
Tetraodon nigroviridis
ENSTNIG00000004400
I
ENSTNIG00000008098
Tetraodon nigroviridis
ENSTNIG00000008098
I
hlfa
Tetraodon nigroviridis
ENSTNIG00000011274
I
tefa
Tetraodon nigroviridis
ENSTNIG00000012940
I
tefb
Takifugu rubripes
ENSTRUG00000003565
I
hlfa
Takifugu rubripes
ENSTRUG00000003731
I
ENSTRUG00000003893
Takifugu rubripes
ENSTRUG00000003893
I
hlfb
Takifugu rubripes
ENSTRUG00000003909
I
ENSTRUG00000007098
Takifugu rubripes
ENSTRUG00000007098
I
tefa
Takifugu rubripes
ENSTRUG00000017028
I
ENSTSYG00000008965
Tarsius syrichta
ENSTSYG00000008965
I
ENSTSYG00000009210
Tarsius syrichta
ENSTSYG00000009210
I
TEF
Tursiops truncatus
ENSTTRG00000003365
I
HLF
Tursiops truncatus
ENSTTRG00000007194
I
TEF
Vicugna pacos
ENSVPAG00000002612
I
ENSXMAG00000000678
Xiphophorus maculatus
ENSXMAG00000000678
I
ENSXMAG00000012054
Xiphophorus maculatus
ENSXMAG00000012054
I
ENSXMAG00000012903
Xiphophorus maculatus
ENSXMAG00000012903
I
ENSXMAG00000014158
Xiphophorus maculatus
ENSXMAG00000014158
I
ENSXMAG00000016939
Xiphophorus maculatus
ENSXMAG00000016939
I
e_gw.273.32.1
Branchiostoma floridae
e_gw.273.32.1
I
e_gw.273.54.1
Branchiostoma floridae
e_gw.273.54.1
I
Gfo_R004744
Geospiza fortis
Gfo_R004744
I
Gfo_R006518
Geospiza fortis
Gfo_R006518
I
HHAL005759-PA
Halyomorpha halys
HHAL005759-PA
I
HMEL011029
Heliconius melpomene
HMEL011029
I
ISCW004978
Ixodes scapularis
ISCW004978
I
KGM_21614
Danaus plexippus
KGM_21614
I
MCINX004280
Melitaea cinxia
MCINX004280
I
Myotis_brandtii_Hlf_10020713
Myotis brandtii
Myotis_brandtii_Hlf_10020713
I
Myotis_brandtii_Tef_10013968
Myotis brandtii
Myotis_brandtii_Tef_10013968
I
Ocbimv22024947m.g
Octopus bimaculoides
Ocbimv22024947m.g
I
Ogr00037
Ophisaurus gracilis
Ogr00037
I
Ogr14443
Ophisaurus gracilis
Ogr14443
I
Pvit_00680
Pogona vitticeps
Pvit_00680
I
Pvit_18616
Pogona vitticeps
Pvit_18616
I
SMAR002779
Strigamia maritima
SMAR002779
I
SPU_004414
Strongylocentrotus purpuratus
SPU_004414
I
Tal_R002658
Tyto alba
Tal_R002658
I
Tal_R009182
Tyto alba
Tal_R009182
I
tetur19g00770
Tetranychus urticae
tetur19g00770
I
dbp.L
Xenopus laevis
XB-GENE-6256610
I
hlf
Xenopus tropicalis
XB-GENE-955698
I
tef
Xenopus tropicalis
XB-GENE-962732
I
tef.S
Xenopus laevis
XB-GENE-962737
I
XP_002937859
Xenopus tropicalis
XP_002937859
I