CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30038236m.g
(
Saccoglossus kowalevskii
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Sakowv30038236m.g
T307057_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23938777_peptide
Nuclear receptor
72
142
PCCRICGDFSSGIHYGVVSCEGCKGFFRRCIAQKKVFAKCLKGGECQIQKSNRGRCPECRYKRCVASGMSI
Links
Other
Nuclear receptor
family TFs
Other
Saccoglossus kowalevskii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5793
Brugia malayi
Bm5793
N
BTMF_0000803501
Brugia timori
BTMF_0000803501
N
DME_0000750701
Dracunculus medinensis
DME_0000750701
N
GPUH_0000193501
Gongylonema pulchrum
GPUH_0000193501
N
GPUH_0002177401
Gongylonema pulchrum
GPUH_0002177401
N
LOAG_12129
Loa loa
LOAG_12129
N
nAv.1.0.1.g10349
Acanthocheilonema viteae
nAv.1.0.1.g10349
N
nDi.2.2.2.g00452
Dirofilaria immitis
nDi.2.2.2.g00452
N
nLs.2.1.2.g06398
Litomosoides sigmodontis
nLs.2.1.2.g06398
N
nOo.2.0.1.g10267
Onchocerca ochengi
nOo.2.0.1.g10267
N
OFLC_0000273301
Onchocerca flexuosa
OFLC_0000273301
N
WBGene00247290
Onchocerca volvulus
WBGene00247290
N