CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

HHAL007294-PA *(Halyomorpha halys)* Nuclear receptor
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00105 (zf-C4)	IPR001628	HHAL007294-PA	T307107_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
tll M02408_2.00	Drosophila melanogaster	NRASGTCAANNN	NNNTTGACSTYN	PBM Weirauch et al.(2014) pTH5714	0.989	0.829
tll M03932_2.00	Drosophila melanogaster	NRAGTCAAAAGTCA	TGACTTTTGACTYN	SELEX Nitta et al.(2015) tll_1	0.989	0.829
tll M03933_2.00	Drosophila melanogaster	NRAGTCAADAAGTCA	TGACTTHTTGACTYN	SELEX Nitta et al.(2015) tll_2	0.989	0.829
tll M06558_2.00	Drosophila melanogaster	WAAAGTCAAM	KTTGACTTTW	B1H Mathelier et al.(2014) MA0459.1	0.989	0.829
tll M06424_2.00	Drosophila melanogaster	AAAGTYA	TRACTTT	B1H Zhu et al.(2011) tll_FlyReg_FBgn0003720	0.989	0.829
tll M06425_2.00	Drosophila melanogaster	WAAAGTCAAM	KTTGACTTTW	B1H Zhu et al.(2011) tll_NAR_FBgn0003720	0.989	0.829
tll M09688_2.00	Drosophila melanogaster	MAAAGTCAAH	DTTGACTTTK	Misc Kulakovskiy et al.(2009) tll	0.989	0.829
tll M11190_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$TLL_Q6	0.989	0.829
NR2E1 M02394_2.00	Homo sapiens	NGAGGTCARN	NYTGACCTCN	PBM Weirauch et al.(2014) pTH6281	0.922	0.786
Nr2e1 M00814_2.00	Mus musculus	NNNGTYRNNN	NNNYRACNNN	PBM Weirauch et al.(2013) pTH2936	0.922	0.786
A1YGC6_PANPA M02421_2.00	Pan paniscus	NNGTCANNN	NNNTGACNN	PBM Weirauch et al.(2014) pTH5561	0.922	0.786
NR2E1 M03364_2.00	Homo sapiens	WDAAGTCAA	TTGACTTHW	SELEX Jolma et al.(2013) NR2E1_1	0.922	0.786
NR2E1 M03365_2.00	Homo sapiens	RARTCAWDAAGTCA	TGACTTHWTGAYTY	SELEX Jolma et al.(2013) NR2E1_2	0.922	0.786
Nr2e1 M03427_2.00	Mus musculus	WDAAGTCAW	WTGACTTHW	SELEX Jolma et al.(2013) Nr2e1_1	0.922	0.786
Nr2e1 M03428_2.00	Mus musculus	RRGTCAWDAAGTCA	TGACTTHWTGACYY	SELEX Jolma et al.(2013) Nr2e1_2	0.922	0.786
NR2E1 M05585_2.00	Homo sapiens	NNAAGTCAN	NTGACTTNN	SELEX Yin et al.(2017) NR2E1_FL_HT-SELEX	0.922	0.786
NR2E1 M05586_2.00	Homo sapiens	NDAAGTCAN	NTGACTTHN	SELEX Yin et al.(2017) NR2E1_FL_Methyl-HT-SELEX	0.922	0.786
dsf M06431_2.00	Drosophila melanogaster	AAAAGTCANH	DNTGACTTTT	B1H Zhu et al.(2011) dsf_SANGER_5_FBgn0015381	0.900	0.757
Hnf4 M03935_2.00	Drosophila melanogaster	RGGKCAAAGGTCA	TGACCTTTGMCCY	SELEX Nitta et al.(2015) Hnf4_1	0.774	0.586
Hnf4 M03936_2.00	Drosophila melanogaster	RGGKCAAAGTYCA	TGRACTTTGMCCY	SELEX Nitta et al.(2015) Hnf4_2	0.774	0.586
Hnf4 M03937_2.00	Drosophila melanogaster	RGTVCAAAGKTCR	YGAMCTTTGBACY	SELEX Nitta et al.(2015) Hnf4_3	0.774	0.586
Hnf4 M03938_2.00	Drosophila melanogaster	RTGRACTTTGGACY	RGTCCAAAGTYCAY	SELEX Nitta et al.(2015) Hnf4_4	0.774	0.586
Hnf4 M06428_2.00	Drosophila melanogaster	DKNKWSSNGGGGTCA	TGACCCCNSSWMNMH	B1H Zhu et al.(2011) Hnf4_SANGER_10_FBgn0004914	0.774	0.586
Hnf4 M06429_2.00	Drosophila melanogaster	GGGGTCAH	DTGACCCC	B1H Zhu et al.(2011) Hnf4_SANGER_5_FBgn0004914	0.774	0.586
Hr83 M06434_2.00	Drosophila melanogaster	RAAGTCANHVWVGM	KCBWBDNTGACTTY	B1H Zhu et al.(2011) Hr83_SANGER_5_FBgn0037436	0.774	0.571
GA30480 M02409_2.00	Drosophila pseudoobscura	RAGATCAM	KTGATCTY	PBM Weirauch et al.(2014) pTH5877	0.767	0.686
Hr51 M06432_2.00	Drosophila melanogaster	AMRDATCARARGW	WCYTYTGATHYKT	B1H Zhu et al.(2011) Hr51_SANGER_5_FBgn0034012	0.767	0.686
HNF4G M08155_2.00	Homo sapiens	NVRGDNCAAAGKYCA	TGRMCTTTGNHCYBN	ChIP-seq Mathelier et al.(2014) MA0484.1	0.752	0.571
HNF4G M09287_2.00	Homo sapiens	VRGDNCAAAGKYCA	TGRMCTTTGNHCYB	Misc Kulakovskiy et al.(2013) HNF4G_HUMAN.H11MO.0.B	0.752	0.571
Hnf4g M09307_2.00	Mus musculus	VRGDNCAAAGKYCA	TGRMCTTTGNHCYB	Misc Kulakovskiy et al.(2013) HNF4G_MOUSE.H11MO.0.C	0.752	0.571
HNF4G M11155_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF4G_01	0.752	0.571
HNF4G M11156_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HNF4G_02	0.752	0.571
For this family, TFs with SR scores > 0.745* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
HHAL007294-PA	Nuclear receptor	42	113	IPCRVCQDHSSGKHYGIFACDGCAGFFKRSIRRNRQYVCKAKGEGACLVDKTHRNQCRACRLRKCLEAGMNK

Links
Other Nuclear receptor family TFs
Other *Halyomorpha halys* TFs

450 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

HHAL007294-PA (Halyomorpha halys) Nuclear receptor

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

450 Related TFs

HHAL007294-PA **(Halyomorpha halys)
Nuclear receptor**