AATE004130 (Anopheles atroparvus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 AATE004130 T307497_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr83
M06434_2.00 		Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY		 B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436 		0.977 0.686
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.793 0.629
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.793 0.629
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.793 0.629
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.793 0.629
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.793 0.629
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.793 0.629
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.793 0.629
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.793 0.629
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.793 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AATE004130-PA Nuclear receptor 6 76

Links

Other Nuclear receptor family TFs
Other Anopheles atroparvus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G08167 Brachypodium distachyon BRADI5G08167 N
F775_11712 Aegilops tauschii F775_11712 N
Traes_2BL_A89BDB407 Triticum aestivum Traes_2BL_A89BDB407 N
Traes_2DL_474B433DF Triticum aestivum Traes_2DL_474B433DF N
Traes_7DS_7B303CBAF Triticum aestivum Traes_7DS_7B303CBAF N
TRIUR3_26386 Triticum urartu TRIUR3_26386 N