CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf11763-augustus-gene-0.3
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf11763-augustus-gene-0.3
T309590_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf11763-augustus-gene-0.3-mRNA-1
Nuclear receptor
51
120
TKCCVCGYICSGYVYYNVVCCDGCKHFFRRCCNAKESYKCKDGGNCNVMNVAIKCKSCRFDKCILAGMRI
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0001885601
Ascaris lumbricoides
ALUE_0001885601
N
ANCCEY_01474
Ancylostoma ceylanicum
ANCCEY_01474
N
ASU_15182
Ascaris suum
ASU_15182
N
Bm6550
Brugia malayi
Bm6550
N
DME_0000028701
Dracunculus medinensis
DME_0000028701
N
EEL_0000847601
Elaeophora elaphi
EEL_0000847601
N
EVEC_0001283901
Enterobius vermicularis
EVEC_0001283901
N
Hba_18486
Heterorhabditis bacteriophora
Hba_18486
N
HPLM_0001382501
Haemonchus placei
HPLM_0001382501
N
L889_g14208
Steinernema feltiae
L889_g14208
N
L892_g27879
Steinernema scapterisci
L892_g27879
I
LOAG_13296
Loa loa
LOAG_13296
N
NBR_0000071001
Nippostrongylus brasiliensis
NBR_0000071001
N
SMUV_0001103601
Syphacia muris
SMUV_0001103601
N
TCLT_0000242201
Thelazia callipaeda
TCLT_0000242201
N
dmd-3
Caenorhabditis elegans
WBGene00012832
D
WBGene00242840
Onchocerca volvulus
WBGene00242840
N