PTRK_0001312000 (Parastrongyloides trichosuri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PTRK_0001312000 T310038_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.988 0.757
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.961 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0001312000.1 Nuclear receptor 21 90

Links

Other Nuclear receptor family TFs
Other Parastrongyloides trichosuri TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I
AACERI_AaceriADL331C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL331C I
AB08896.1 Alternaria brassicicola AB08896.1 N
ACRE_020880 Acremonium chrysogenum ACRE_020880 N
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I
AGOS_ADL331C Ashbya gossypii AGOS_ADL331C I
BDDG_02210 Blastomyces dermatitidis BDDG_02210 I
BN946_scf184844.g19 Trametes cinnabarina BN946_scf184844.g19 N
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I
CADANGAG00000780 Aspergillus niger CADANGAG00000780 I
CC1G_08141 Coprinopsis cinerea CC1G_08141 I
CGGC5_15243 Colletotrichum gloeosporioides CGGC5_15243 I
CH063_07887 Colletotrichum higginsianum CH063_07887 I
CHGG_02745 Chaetomium globosum CHGG_02745 I
Cob_07979 Colletotrichum orbiculare Cob_07979 I
COCC4DRAFT_125132 Bipolaris maydis COCC4DRAFT_125132 I
COCMIDRAFT_88977 Bipolaris oryzae COCMIDRAFT_88977 I
COCSADRAFT_159051 Bipolaris sorokiniana COCSADRAFT_159051 I
csin105999 Clonorchis sinensis csin105999 I
CSUB01_06308 Colletotrichum sublineola CSUB01_06308 I
CTHT_0010110 Chaetomium thermophilum CTHT_0010110 I
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I
Ecym_3473 Eremothecium cymbalariae Ecym_3473 I
estExt_fgeneshPB_pg.C_100218 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_100218 N
EURHEDRAFT_505813 Aspergillus ruber EURHEDRAFT_505813 I
fgenesh1_pg.00676_#_1 Aspergillus carbonarius fgenesh1_pg.00676_#_1 I
fgeneshMC_pg.2_#_1032 Mucor circinelloides fgeneshMC_pg.2_#_1032 N
fgeneshMC_pg.3_#_381 Mucor circinelloides fgeneshMC_pg.3_#_381 N
fgeneshPB_pg.1__316 Phycomyces blakesleeanus fgeneshPB_pg.1__316 N
FIBRA_02642 Fibroporia radiculosa FIBRA_02642 I
FIBRA_03355 Fibroporia radiculosa FIBRA_03355 I
FOMPIDRAFT_1078602 Fomitopsis pinicola FOMPIDRAFT_1078602 I
GALMADRAFT_227034 Galerina marginata GALMADRAFT_227034 N
GALMADRAFT_33159 Galerina marginata GALMADRAFT_33159 I
GLOINDRAFT_25061 Rhizophagus irregularis GLOINDRAFT_25061 I
GLOINDRAFT_29935 Rhizophagus irregularis GLOINDRAFT_29935 N
GLOINDRAFT_46580 Rhizophagus irregularis GLOINDRAFT_46580 I
GLOINDRAFT_47695 Rhizophagus irregularis GLOINDRAFT_47695 I
GLRG_03847 Colletotrichum graminicola GLRG_03847 I
gw1.15.231.1 Heterobasidion annosum gw1.15.231.1 I
HCBG_03487 Histoplasma capsulatum HCBG_03487 I
HCBG_03538 Histoplasma capsulatum HCBG_03538 I
HETIRDRAFT_18754 Heterobasidion irregulare HETIRDRAFT_18754 I
J056_002105 Wallemia ichthyophaga J056_002105 N
JAAARDRAFT_113690 Jaapia argillacea JAAARDRAFT_113690 I
JAAARDRAFT_93880 Jaapia argillacea JAAARDRAFT_93880 I
K437DRAFT_265905 Tilletiaria anomala K437DRAFT_265905 I
KLTH0F13926g Kluyveromyces thermotolerans KLTH0F13926g I
KLTH0F13926g Lachancea thermotolerans KLTH0F13926g I
Kwal_21061 Kluyveromyces waltii Kwal_21061 I
LEMA_P114390.1 Leptosphaeria maculans LEMA_P114390.1 I
M404DRAFT_69899 Pisolithus tinctorius M404DRAFT_69899 I
M407DRAFT_219396 Tulasnella calospora M407DRAFT_219396 N
M408DRAFT_22846 Serendipita vermifera M408DRAFT_22846 N
M422DRAFT_110441 Sphaerobolus stellatus M422DRAFT_110441 N
M422DRAFT_195883 Sphaerobolus stellatus M422DRAFT_195883 N
Moror_2098 Moniliophthora roreri Moror_2098 I
MYCTH_2115094 Myceliophthora thermophila MYCTH_2115094 I
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I
NDAI_0A05180 Naumovozyma dairenensis NDAI_0A05180 I
PAAG_03088 Paracoccidioides sp lutzii PAAG_03088 I
PABG_00540 Paracoccidioides brasiliensis PABG_00540 I
PFICI_01201 Pestalotiopsis fici PFICI_01201 I
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N
PISMIDRAFT_31667 Pisolithus microcarpus PISMIDRAFT_31667 I
PLEOSDRAFT_1081881 Pleurotus ostreatus PLEOSDRAFT_1081881 I
PODANS_1_13940 Podospora anserina PODANS_1_13940 I
PSEUBRA_SCAF5g02306 Pseudozyma brasiliensis PSEUBRA_SCAF5g02306 N
PTRG_07337 Pyrenophora triticirepentis PTRG_07337 N
PTT_09966 Pyrenophora teres PTT_09966 N
PV05_11046 Exophiala xenobiotica PV05_11046 I
PV06_03562 Exophiala oligosperma PV06_03562 I
PV08_05977 Exophiala spinifera PV08_05977 I
PV11_08420 Exophiala sideris PV11_08420 I
RO3G_03011 Rhizopus oryzae RO3G_03011 N
RO3G_10625 Rhizopus oryzae RO3G_10625 N
SAKL0B07656g Lachancea kluyveri SAKL0B07656g I
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I
SAPIO_CDS6811 Scedosporium apiospermum SAPIO_CDS6811 I
SBOR_9074 Sclerotinia borealis SBOR_9074 I
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I
SCHCODRAFT_111770 Schizophyllum commune SCHCODRAFT_111770 I
SCHCODRAFT_113446 Schizophyllum commune SCHCODRAFT_113446 I
SCHCODRAFT_114945 Schizophyllum commune SCHCODRAFT_114945 I
SCHCODRAFT_114988 Schizophyllum commune SCHCODRAFT_114988 I
SCLCIDRAFT_11527 Scleroderma citrinum SCLCIDRAFT_11527 N
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I
T265_06704 Opisthorchis viverrini T265_06704 I
THITE_2154193 Thielavia terrestris THITE_2154193 I
UHOR_04339 Ustilago hordei UHOR_04339 N
V565_068660 Rhizoctonia solani V565_068660 I
VDAG_08843 Verticillium dahliae VDAG_08843 I
VDBG_05105 Verticillium alfalfae VDBG_05105 I
VDBG_05105 Verticillium albo atrum VDBG_05105 I
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I
ZBAI_00827 Zygosaccharomyces bailii ZBAI_00827 I
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I
ZBAI_06138 Zygosaccharomyces bailii ZBAI_06138 I