CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold1206-EXSNAP2012.1
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold1206-EXSNAP2012.1
T310172_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold1206-EXSNAP2012.1
Nuclear receptor
95
166
EKCLLCKDRASGYHYGVLSCEACKGFFRRSISKNEQYVCQSQHKDACIINMESRYRCHACRLSKCISQGMSK
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_01819
Schistosoma haematobium
A_01819
I
0.821
CGI_10028545
Crassostrea gigas
CGI_10028545
I
0.748
CGOC_0000088801
Cylicostephanus goldi
CGOC_0000088801
I
0.746
csin110418
Clonorchis sinensis
csin110418
I
0.797
D915_09414
Fasciola hepatica
D915_09414
I
0.813
DICVIV_09548
Dictyocaulus viviparus
DICVIV_09548
I
0.750
ENSFALG00000004358
Ficedula albicollis
ENSFALG00000004358
I
0.753
ENSPMAG00000006138
Petromyzon marinus
ENSPMAG00000006138
I
0.749
RARG
Taeniopygia guttata
ENSTGUG00000003804
I
0.753
GPLIN_000153900
Globodera pallida
GPLIN_000153900
I
0.770
HPBE_0001507701
Heligmosomoides bakeri
HPBE_0001507701
I
0.751
L596_g16701
Steinernema carpocapsae
L596_g16701
I
0.765
L893_g24576
Steinernema glaseri
L893_g24576
I
0.758
L898_g17415
Steinernema monticolum
L898_g17415
I
0.762
PTRK_0000641400
Parastrongyloides trichosuri
PTRK_0000641400
I
0.753
Sjc_0058250
Schistosoma japonicum
Sjc_0058250
I
0.821
Smp_139360
Schistosoma mansoni
Smp_139360
I
0.821
SMRZ_0001531701
Schistosoma margrebowiei
SMRZ_0001531701
I
0.821
SNAPOd2T00007449001
Oikopleura dioica
SNAPOd2T00007449001
I
0.792
T265_07403
Opisthorchis viverrini
T265_07403
I
0.797
TELCIR_00096
Teladorsagia circumcincta
TELCIR_00096
I
0.751
tetur19g00650
Tetranychus urticae
tetur19g00650
I
0.750
TRE_0001126701
Trichobilharzia regenti
TRE_0001126701
I
0.813
TriadG9010
Trichoplax adhaerens
TriadG9010
I
0.788