scaffold314-EXSNAP2012.19 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold314-EXSNAP2012.19 T310244_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.955 0.686
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.835 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold314-EXSNAP2012.19 Nuclear receptor 37 106

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC165178.2_FG004 Zea mays AC165178.2_FG004 I
BGIOSGA028729 Oryza indica BGIOSGA028729 I
BGIOSGA028730 Oryza indica BGIOSGA028730 I
BRADI3G37047 Brachypodium distachyon BRADI3G37047 I
BRADI4G30220 Brachypodium distachyon BRADI4G30220 I
F775_18838 Aegilops tauschii F775_18838 N
F775_21295 Aegilops tauschii F775_21295 N
F775_22368 Aegilops tauschii F775_22368 N
F775_25655 Aegilops tauschii F775_25655 I
GLYMA19G24531 Glycine max GLYMA19G24531 N
GSMUA_Achr8G16920_001 Musa acuminata GSMUA_Achr8G16920_001 N
LPERR09G07060 Leersia perrieri LPERR09G07060 I
Lus10005243.g Linum usitatissimum Lus10005243.g N
MLOC_34885 Hordeum vulgare MLOC_34885 I
OB09G16780 Oryza brachyantha OB09G16780 I
OGLUM07G13540 Oryza glumaepatula OGLUM07G13540 N
OS07G0484700 Oryza sativa OS07G0484700 N
OS08G0437300 Oryza sativa OS08G0437300 I
Pavir.Ba01835 Panicum virgatum Pavir.Ba01835 I
Pavir.Bb02186 Panicum virgatum Pavir.Bb02186 I
PDK_20s1306201g001 Phoenix dactylifera PDK_20s1306201g001 I
Traes_5BL_632EBAD09 Triticum aestivum Traes_5BL_632EBAD09 I
Traes_5DL_1D036F8B5 Triticum aestivum Traes_5DL_1D036F8B5 I