SMTD_0001266401 (Schistosoma mattheei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMTD_0001266401 T310388_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.782 0.543
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.782 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0001266401-mRNA-1 Nuclear receptor 18 87

Links

Other Nuclear receptor family TFs
Other Schistosoma mattheei TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I
BCL11A Myotis lucifugus ENSMLUG00000010117 N
ENSP00000349723-D1 Bos grunniens ENSP00000349723-D1 N