SMTD_0001518001 (Schistosoma mattheei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMTD_0001518001 T310390_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_016180
M02411_2.00 		Schistosoma mansoni
NGGACAYN
NRTGTCCN		 PBM
Weirauch et al.(2014)
pTH5566 		0.992 0.986
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0001518001-mRNA-1 Nuclear receptor 4 75

Links

Other Nuclear receptor family TFs
Other Schistosoma mattheei TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_05964 Schistosoma haematobium A_05964 N
csin107680 Clonorchis sinensis csin107680 N
ECANG7_04784 Echinococcus canadensis ECANG7_04784 N
EmuJ_000817400 Echinococcus multilocularis EmuJ_000817400 N
HmN_000539500 Hymenolepis microstoma HmN_000539500 N
HNAJ_0001353001 Hymenolepis nana HNAJ_0001353001 N
SCUD_0000966301 Schistosoma curassoni SCUD_0000966301 N
Sjc_0020540 Schistosoma japonicum Sjc_0020540 N
Smp_143190 Schistosoma mansoni Smp_143190 N
SMRZ_0001337301 Schistosoma margrebowiei SMRZ_0001337301 N
SSLN_0000929901 Schistocephalus solidus SSLN_0000929901 N
T265_06110 Opisthorchis viverrini T265_06110 N
TRE_0001728601 Trichobilharzia regenti TRE_0001728601 N
TsM_000750100 Taenia solium TsM_000750100 N
TTAC_0000325101 Hydatigera taeniaeformis TTAC_0000325101 N