CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0001084400
(
Strongyloides papillosus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SPAL_0001084400
T310500_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.881
0.571
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.826
0.571
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0001084400.1
Nuclear receptor
58
127
QKCLVCGDSSSGIHYGIISCNGCKTFFRRVVIENRTYSCQNDGKCIIDKSMRCACRHCRFKKCLDLGMDR
Links
Other
Nuclear receptor
family TFs
Other
Strongyloides papillosus
TFs
220 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_005700
Acremonium chrysogenum
ACRE_005700
N
BBA_07544
Beauveria bassiana
BBA_07544
N
CCM_08959
Cordyceps militaris
CCM_08959
N
CPUR_06627
Claviceps purpurea
CPUR_06627
N
fgenesh1_pm.sca_8_chr1_1_0000139
Nectria haematococca
fgenesh1_pm.sca_8_chr1_1_0000139
N
FGRRES_01576
Fusarium graminearum
FGRRES_01576
N
FOXG_11128
Fusarium oxysporum
FOXG_11128
N
FOXG_12568
Fusarium oxysporum
FOXG_12568
N
FOXG_12619
Fusarium oxysporum
FOXG_12619
N
FOXG_13972
Fusarium oxysporum
FOXG_13972
N
FOXG_17057
Fusarium oxysporum
FOXG_17057
N
FPSE_00757
Fusarium pseudograminearum
FPSE_00757
N
FVEG_09661
Fusarium verticillioides
FVEG_09661
N
MAC_05756
Metarhizium acridum
MAC_05756
N
MAJ_06029
Metarhizium majus
MAJ_06029
N
MAM_04102
Metarhizium album
MAM_04102
N
MANI_007868
Metarhizium anisopliae
MANI_007868
N
MBR_06792
Metarhizium brunneum
MBR_06792
N
MGU_04574
Metarhizium guizhouense
MGU_04574
N
NechaG89702
Fusarium solani
NechaG89702
N
TRIATDRAFT_167723
Trichoderma atroviride
TRIATDRAFT_167723
N
TRIREDRAFT_108357
Trichoderma reesei
TRIREDRAFT_108357
N
TRIVIDRAFT_118500
Trichoderma virens
TRIVIDRAFT_118500
N
VHEMI05713
Torrubiella hemipterigena
VHEMI05713
N
X797_000008
Metarhizium robertsii
X797_000008
N