SPER_0003977401 (Spirometra erinaceieuropaei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SPER_0003977401 T310543_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.790 0.545
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.790 0.545
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.790 0.545
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.790 0.545
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.790 0.545
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.790 0.545
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.757 0.530
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.757 0.530
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.754 0.515
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.754 0.515
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.754 0.515
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.754 0.515
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.754 0.515
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.754 0.515
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.754 0.515
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.754 0.515
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.751 0.515
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.751 0.515
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.751 0.515
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.751 0.515
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.751 0.515
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.751 0.515
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.751 0.515
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.751 0.515
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.751 0.515
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.751 0.515
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.751 0.515
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPER_0003977401-mRNA-1 Nuclear receptor 1 66

Links

Other Nuclear receptor family TFs
Other Spirometra erinaceieuropaei TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009242 Calypte anna Aan_R009242 I 0.754
Aan_R011707 Calypte anna Aan_R011707 I 0.754
Aan_R015083 Calypte anna Aan_R015083 I 0.751
Afo_R002975 Aptenodytes forsteri Afo_R002975 I 0.754
Afo_R006180 Aptenodytes forsteri Afo_R006180 I 0.751
Afo_R010049 Aptenodytes forsteri Afo_R010049 I 0.754
Alligator_sinensis_CCG000418.1 Alligator sinensis Alligator_sinensis_CCG000418.1 I 0.754
Alligator_sinensis_CCG007724.1 Alligator sinensis Alligator_sinensis_CCG007724.1 I 0.754
Brh_R003242 Buceros rhinoceros Brh_R003242 I 0.754
Brh_R004006 Buceros rhinoceros Brh_R004006 I 0.751
Cmyd_10000975 Chelonia mydas Cmyd_10000975 I 0.751
Cmyd_10006717 Chelonia mydas Cmyd_10006717 I 0.754
DILT_0001314401 Diphyllobothrium latum DILT_0001314401 I 0.979
ENSAMEG00000008017 Ailuropoda melanoleuca ENSAMEG00000008017 I 0.751
ENSAMEG00000015664 Ailuropoda melanoleuca ENSAMEG00000015664 I 0.754
ENSAMXG00000000403 Astyanax mexicanus ENSAMXG00000000403 I 0.764
ENSAMXG00000009363 Astyanax mexicanus ENSAMXG00000009363 I 0.747
ENSAMXG00000014990 Astyanax mexicanus ENSAMXG00000014990 I 0.747
ENSAMXG00000018669 Astyanax mexicanus ENSAMXG00000018669 I 0.754
ENSAPLG00000005866 Anas platyrhynchos ENSAPLG00000005866 I 0.751
ENSAPLG00000007187 Anas platyrhynchos ENSAPLG00000007187 I 0.754
ENSAPLG00000011493 Anas platyrhynchos ENSAPLG00000011493 I 0.754
RORA Bos taurus ENSBTAG00000015904 I 0.751
RORC Bos taurus ENSBTAG00000017405 I 0.757
RORB Bos taurus ENSBTAG00000021699 I 0.754
ENSBTAP00000021144-D1 Bos grunniens ENSBTAP00000021144-D1 I 0.751
ENSBTAP00000028921-D1 Bos grunniens ENSBTAP00000028921-D1 I 0.754
RORB Canis familiaris ENSCAFG00000001769 I 0.754
RORA Canis familiaris ENSCAFG00000016700 I 0.751
RORB Choloepus hoffmanni ENSCHOG00000009723 I 0.754
RORA Choloepus hoffmanni ENSCHOG00000011593 I 0.751
ENSCING00000002152 Ciona intestinalis ENSCING00000002152 I 0.777
RORB Callithrix jacchus ENSCJAG00000001216 I 0.754
RORA Callithrix jacchus ENSCJAG00000003989 I 0.751
RORC Callithrix jacchus ENSCJAG00000008023 I 0.790
RORA Cavia porcellus ENSCPOG00000008494 I 0.751
RORB Cavia porcellus ENSCPOG00000010612 I 0.754
ENSCSAG00000001825 Chlorocebus sabaeus ENSCSAG00000001825 I 0.790
ENSCSAG00000008161 Chlorocebus sabaeus ENSCSAG00000008161 I 0.754
ENSCSAG00000012081 Chlorocebus sabaeus ENSCSAG00000012081 I 0.751
ENSCSAVG00000009992 Ciona savignyi ENSCSAVG00000009992 I 0.777
rorab Danio rerio ENSDARG00000001910 I 0.747
rorcb Danio rerio ENSDARG00000017780 I 0.747
roraa Danio rerio ENSDARG00000031768 I 0.764
rorb Danio rerio ENSDARG00000033498 I 0.754
rorca Danio rerio ENSDARG00000057231 I 0.747
RORC Dasypus novemcinctus ENSDNOG00000033488 I 0.757
RORA Dasypus novemcinctus ENSDNOG00000043276 I 0.751
Rora Dipodomys ordii ENSDORG00000001826 I 0.751
Rorc Dipodomys ordii ENSDORG00000015326 I 0.757
RORC Equus caballus ENSECAG00000000918 I 0.757
RORA Equus caballus ENSECAG00000016384 I 0.751
RORB Equus caballus ENSECAG00000024312 I 0.754
RORB Erinaceus europaeus ENSEEUG00000014274 I 0.754
RORA Erinaceus europaeus ENSEEUG00000015809 I 0.751
RORA Echinops telfairi ENSETEG00000001493 I 0.751
RORB Echinops telfairi ENSETEG00000017457 I 0.754
ENSFALG00000012589 Ficedula albicollis ENSFALG00000012589 I 0.751
ENSFALG00000012763 Ficedula albicollis ENSFALG00000012763 I 0.754
RORB Felis catus ENSFCAG00000011421 I 0.754
RORA Felis catus ENSFCAG00000013642 I 0.751
RORA Homo sapiens ENSG00000069667 D 0.751
RORC Homo sapiens ENSG00000143365 D 0.790
RORB Homo sapiens ENSG00000198963 D 0.754
roraa Gasterosteus aculeatus ENSGACG00000010672 I 0.764
rorb Gasterosteus aculeatus ENSGACG00000011556 I 0.754
rorca Gasterosteus aculeatus ENSGACG00000012280 I 0.751
rorcb Gasterosteus aculeatus ENSGACG00000015341 I 0.747
ENSGALG00000001035 Gallus gallus ENSGALG00000001035 I 0.754
RORA Gallus gallus ENSGALG00000003759 I 0.751
RORB Gallus gallus ENSGALG00000015150 I 0.754
RORA Gorilla gorilla ENSGGOG00000000541 I 0.751
RORC Gorilla gorilla ENSGGOG00000002223 I 0.790
RORB Gorilla gorilla ENSGGOG00000011970 I 0.754
ENSGMOG00000006930 Gadus morhua ENSGMOG00000006930 I 0.764
ENSGMOG00000012277 Gadus morhua ENSGMOG00000012277 I 0.747
ENSLACG00000006103 Latimeria chalumnae ENSLACG00000006103 I 0.754
ENSLACG00000017448 Latimeria chalumnae ENSLACG00000017448 I 0.751
RORA Loxodonta africana ENSLAFG00000000577 I 0.751
RORB Loxodonta africana ENSLAFG00000012757 I 0.754
RORC Loxodonta africana ENSLAFG00000020960 I 0.757
ENSLOCG00000006502 Lepisosteus oculatus ENSLOCG00000006502 I 0.747
ENSLOCG00000009712 Lepisosteus oculatus ENSLOCG00000009712 I 0.754
ENSLOCG00000014779 Lepisosteus oculatus ENSLOCG00000014779 I 0.751
ENSMEUG00000008146 Macropus eugenii ENSMEUG00000008146 I 0.757
ENSMGAG00000002222 Meleagris gallopavo ENSMGAG00000002222 I 0.754
RORA Meleagris gallopavo ENSMGAG00000004471 I 0.751
RORB Microcebus murinus ENSMICG00000007512 I 0.754
RORA Microcebus murinus ENSMICG00000010861 I 0.751
RORA Myotis lucifugus ENSMLUG00000002493 I 0.751
RORB Myotis lucifugus ENSMLUG00000006436 I 0.754
RORC Myotis lucifugus ENSMLUG00000029229 I 0.750
RORC Macaca mulatta ENSMMUG00000012138 I 0.790
RORB Macaca mulatta ENSMMUG00000012571 I 0.754
RORA Macaca mulatta ENSMMUG00000018192 I 0.751
RORB Monodelphis domestica ENSMODG00000002046 I 0.754
ENSMODG00000004462 Monodelphis domestica ENSMODG00000004462 I 0.754
RORA Monodelphis domestica ENSMODG00000011532 I 0.751
RORC Monodelphis domestica ENSMODG00000018911 I 0.757
ENSMPUG00000008883 Mustela putorius furo ENSMPUG00000008883 I 0.754
Rorc Mus musculus ENSMUSG00000028150 D 0.757
Rora Mus musculus ENSMUSG00000032238 D 0.751
Rorb Mus musculus ENSMUSG00000036192 D 0.754
ENSNLEG00000001398 Nomascus leucogenys ENSNLEG00000001398 I 0.754
ENSNLEG00000010305 Nomascus leucogenys ENSNLEG00000010305 I 0.790
ENSNLEG00000011865 Nomascus leucogenys ENSNLEG00000011865 I 0.751
RORB Ornithorhynchus anatinus ENSOANG00000011655 I 0.754
RORA Ornithorhynchus anatinus ENSOANG00000012345 I 0.751
ENSOARG00000012659 Ovis aries ENSOARG00000012659 I 0.754
ENSOARG00000020816 Ovis aries ENSOARG00000020816 I 0.751
ENSOARG00000021060 Ovis aries ENSOARG00000021060 I 0.757
RORB Oryctolagus cuniculus ENSOCUG00000003732 I 0.754
RORA Oryctolagus cuniculus ENSOCUG00000012900 I 0.751
RORC Oryctolagus cuniculus ENSOCUG00000022907 I 0.757
RORB Otolemur garnettii ENSOGAG00000001523 I 0.754
RORA Otolemur garnettii ENSOGAG00000007357 I 0.751
RORC Otolemur garnettii ENSOGAG00000024385 I 0.757
ENSONIG00000004686 Oreochromis niloticus ENSONIG00000004686 I 0.747
ENSONIG00000010247 Oreochromis niloticus ENSONIG00000010247 I 0.747
ENSONIG00000010762 Oreochromis niloticus ENSONIG00000010762 I 0.754
ENSONIG00000015289 Oreochromis niloticus ENSONIG00000015289 I 0.764
ENSONIG00000015603 Oreochromis niloticus ENSONIG00000015603 I 0.751
RORA Ochotona princeps ENSOPRG00000012364 I 0.751
RORB Ochotona princeps ENSOPRG00000016130 I 0.754
RORC Ochotona princeps ENSOPRG00000018310 I 0.757
rorca Oryzias latipes ENSORLG00000003765 I 0.747
roraa Oryzias latipes ENSORLG00000007645 I 0.764
rorb Oryzias latipes ENSORLG00000012441 I 0.754
ENSP00000261523 Macaca fascicularis ENSP00000261523 I 0.751
ENSP00000376461 Macaca fascicularis ENSP00000376461 I 0.790
ENSP00000376461-D1 Bos grunniens ENSP00000376461-D1 I 0.757
ENSP00000379507 Macaca fascicularis ENSP00000379507 I 0.754
ENSPANG00000017172 Papio anubis ENSPANG00000017172 I 0.751
ENSPANG00000020758 Papio anubis ENSPANG00000020758 I 0.790
ENSPANG00000024927 Papio anubis ENSPANG00000024927 I 0.754
RORC Procavia capensis ENSPCAG00000005628 I 0.750
RORA Procavia capensis ENSPCAG00000006566 I 0.751
RORB Procavia capensis ENSPCAG00000012274 I 0.754
ENSPFOG00000000838 Poecilia formosa ENSPFOG00000000838 I 0.754
ENSPFOG00000003699 Poecilia formosa ENSPFOG00000003699 I 0.764
ENSPFOG00000012359 Poecilia formosa ENSPFOG00000012359 I 0.747
ENSPFOG00000015704 Poecilia formosa ENSPFOG00000015704 I 0.754
ENSPFOG00000017745 Poecilia formosa ENSPFOG00000017745 I 0.747
ENSPMAG00000009286 Petromyzon marinus ENSPMAG00000009286 I 0.754
ENSPPYG00000000853 Pongo abelii ENSPPYG00000000853 I 0.790
ENSPPYG00000006528 Pongo abelii ENSPPYG00000006528 I 0.751
ENSPPYG00000019294 Pongo abelii ENSPPYG00000019294 I 0.754
ENSPSIG00000005579 Pelodiscus sinensis ENSPSIG00000005579 I 0.754
ENSPSIG00000011314 Pelodiscus sinensis ENSPSIG00000011314 I 0.751
ENSPSIG00000016262 Pelodiscus sinensis ENSPSIG00000016262 I 0.754
RORA Pan troglodytes ENSPTRG00000007134 I 0.751
RORB Pan troglodytes ENSPTRG00000021025 I 0.754
RORC Pan troglodytes ENSPTRG00000032436 I 0.790
RORB Pteropus vampyrus ENSPVAG00000007216 I 0.754
RORC Pteropus vampyrus ENSPVAG00000008917 I 0.750
RORA Pteropus vampyrus ENSPVAG00000011408 I 0.751
Rorb Rattus norvegicus ENSRNOG00000013413 I 0.754
Rorc Rattus norvegicus ENSRNOG00000020836 I 0.757
Rora Rattus norvegicus ENSRNOG00000027145 I 0.751
ENSSHAG00000002191 Sarcophilus harrisii ENSSHAG00000002191 I 0.754
ENSSHAG00000015734 Sarcophilus harrisii ENSSHAG00000015734 I 0.751
ENSSHAG00000015984 Sarcophilus harrisii ENSSHAG00000015984 I 0.757
ENSSHAG00000018693 Sarcophilus harrisii ENSSHAG00000018693 I 0.754
RORA Sus scrofa ENSSSCG00000004576 I 0.751
RORB Sus scrofa ENSSSCG00000005268 I 0.754
RORC Sus scrofa ENSSSCG00000026427 I 0.757
ENSSTOG00000012400 Ictidomys tridecemlineatus ENSSTOG00000012400 I 0.751
ENSSTOG00000013264 Ictidomys tridecemlineatus ENSSTOG00000013264 I 0.754
ENSSTOG00000019386 Ictidomys tridecemlineatus ENSSTOG00000019386 I 0.757
RORA Tupaia belangeri ENSTBEG00000003065 I 0.751
RORB Tupaia belangeri ENSTBEG00000010761 I 0.754
ENSTGUG00000000264 Taeniopygia guttata ENSTGUG00000000264 I 0.754
RORB Taeniopygia guttata ENSTGUG00000000785 I 0.754
RORA Taeniopygia guttata ENSTGUG00000005333 I 0.751
roraa Tetraodon nigroviridis ENSTNIG00000008390 I 0.764
rorb Tetraodon nigroviridis ENSTNIG00000014682 D 0.754
rorcb Tetraodon nigroviridis ENSTNIG00000015337 I 0.747
ENSTRUG00000002901 Takifugu rubripes ENSTRUG00000002901 I 0.754
rorca Takifugu rubripes ENSTRUG00000003189 I 0.747
rorcb Takifugu rubripes ENSTRUG00000005569 I 0.747
roraa Takifugu rubripes ENSTRUG00000010553 I 0.764
ENSTSYG00000001170 Tarsius syrichta ENSTSYG00000001170 I 0.751
ENSTSYG00000007907 Tarsius syrichta ENSTSYG00000007907 I 0.754
ENSTSYG00000010455 Tarsius syrichta ENSTSYG00000010455 I 0.750
RORC Tursiops truncatus ENSTTRG00000003151 I 0.757
RORA Tursiops truncatus ENSTTRG00000007718 I 0.751
RORB Vicugna pacos ENSVPAG00000003390 I 0.754
RORA Vicugna pacos ENSVPAG00000007893 I 0.751
ENSXMAG00000003228 Xiphophorus maculatus ENSXMAG00000003228 I 0.764
ENSXMAG00000015567 Xiphophorus maculatus ENSXMAG00000015567 I 0.754
ENSXMAG00000018442 Xiphophorus maculatus ENSXMAG00000018442 I 0.754
ENSXMAG00000019296 Xiphophorus maculatus ENSXMAG00000019296 I 0.747
Gfo_R007588 Geospiza fortis Gfo_R007588 I 0.754
Gfo_R008263 Geospiza fortis Gfo_R008263 I 0.754
Gfo_R008829 Geospiza fortis Gfo_R008829 I 0.751
gw.311.78.1 Branchiostoma floridae gw.311.78.1 I 0.764
Myotis_brandtii_RORA_10029423 Myotis brandtii Myotis_brandtii_RORA_10029423 I 0.751
Myotis_brandtii_RORB_10034418 Myotis brandtii Myotis_brandtii_RORB_10034418 I 0.754
Myotis_brandtii_RORC_10008053 Myotis brandtii Myotis_brandtii_RORC_10008053 I 0.750
Ogr03392 Ophisaurus gracilis Ogr03392 I 0.751
Pvit_09819 Pogona vitticeps Pvit_09819 I 0.751
Pvit_12494 Pogona vitticeps Pvit_12494 I 0.754
Pvit_17369 Pogona vitticeps Pvit_17369 I 0.751
Pvit_17370 Pogona vitticeps Pvit_17370 I 0.751
SPER_0002219401 Spirometra erinaceieuropaei SPER_0002219401 I 0.993
SSLN_0000693201 Schistocephalus solidus SSLN_0000693201 I 0.989
Tal_R010110 Tyto alba Tal_R010110 I 0.754
rora Xenopus tropicalis XB-GENE-478535 I 0.751
rorb Xenopus tropicalis XB-GENE-484846 I 0.754
XP_002937524 Xenopus tropicalis XP_002937524 I 0.751