ENSLACG00000014214 (Latimeria chalumnae)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSLACG00000014214 T311053_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Trp63
M09338_2.00 		Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH		 Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B 		0.974 0.974
TP73
M08035_2.00 		Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin 		0.862 0.862
TP73
M08036_2.00 		Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle 		0.862 0.862
TP73
M08037_2.00 		Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY		 ChIP-seq
Chen et al.(2011)
GSE18650_TP73 		0.862 0.862
TP73
M09336_2.00 		Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A 		0.862 0.862
TP73
M11196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P73_Q6 		0.862 0.862
Trp73
M03438_2.00 		Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH		 SELEX
Jolma et al.(2013)
Tp73_1 		0.847 0.847
Trp73
M09339_2.00 		Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B 		0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000016137 p53 69 265
ENSLACP00000022643 p53 127 323

Links

Other p53 family TFs
Other Latimeria chalumnae TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0001241401 Angiostrongylus costaricensis ACOC_0001241401 I 0.000
ALUE_0000326401 Ascaris lumbricoides ALUE_0000326401 I 0.000
ANCCAN_03294 Ancylostoma caninum ANCCAN_03294 I 0.000
ANCCEY_09166 Ancylostoma ceylanicum ANCCEY_09166 I 0.000
ASIM_0000214101 Anisakis simplex ASIM_0000214101 I 0.000
ASIM_0001335601 Anisakis simplex ASIM_0001335601 I 0.000
ASU_05094 Ascaris suum ASU_05094 I 0.000
BGLB003270 Biomphalaria glabrata BGLB003270 I 0.000
BGLB009720 Biomphalaria glabrata BGLB009720 I 0.000
Bm3413 Brugia malayi Bm3413 I 0.000
Bm7588 Brugia malayi Bm7588 I 0.000
BTMF_0000617301 Brugia timori BTMF_0000617301 I 0.000
BTMF_0000787301 Brugia timori BTMF_0000787301 I 0.000
CBG19808 Caenorhabditis briggsae CBG19808 I 0.000
CJA10655 Caenorhabditis japonica CJA10655 I 0.000
CRE13954 Caenorhabditis remanei CRE13954 I 0.000
DICVIV_06567 Dictyocaulus viviparus DICVIV_06567 I 0.000
DME_0000215901 Dracunculus medinensis DME_0000215901 I 0.000
EEL_0000071901 Elaeophora elaphi EEL_0000071901 I 0.000
EEL_0000232301 Elaeophora elaphi EEL_0000232301 I 0.000
EVEC_0000550601 Enterobius vermicularis EVEC_0000550601 I 0.000
GPUH_0000579801 Gongylonema pulchrum GPUH_0000579801 I 0.000
HCOI01537900 Haemonchus contortus HCOI01537900 I 0.000
HPLM_0000323401 Haemonchus placei HPLM_0000323401 I 0.000
HPLM_0000755401 Haemonchus placei HPLM_0000755401 I 0.000
ISCW006531 Ixodes scapularis ISCW006531 I 0.000
L596_g3194 Steinernema carpocapsae L596_g3194 I 0.000
L889_g9945 Steinernema feltiae L889_g9945 I 0.000
L893_g26459 Steinernema glaseri L893_g26459 I 0.000
L898_g30246 Steinernema monticolum L898_g30246 I 0.000
LOAG_04491 Loa loa LOAG_04491 I 0.000
nAv.1.0.1.g04605 Acanthocheilonema viteae nAv.1.0.1.g04605 I 0.000
nAv.1.0.1.g06570 Acanthocheilonema viteae nAv.1.0.1.g06570 I 0.000
nDi.2.2.2.g01315 Dirofilaria immitis nDi.2.2.2.g01315 I 0.000
nDi.2.2.2.g04619 Dirofilaria immitis nDi.2.2.2.g04619 I 0.000
nDi.2.2.2.g10294 Dirofilaria immitis nDi.2.2.2.g10294 I 0.000
nLs.2.1.2.g06633 Litomosoides sigmodontis nLs.2.1.2.g06633 I 0.000
nOo.2.0.1.g09202 Onchocerca ochengi nOo.2.0.1.g09202 I 0.000
OFLC_0001455401 Onchocerca flexuosa OFLC_0001455401 I 0.000
PEQ_0001019701 Parascaris equorum PEQ_0001019701 I 0.000
PTRK_0001316500 Parastrongyloides trichosuri PTRK_0001316500 I 0.000
SMAR014806 Strigamia maritima SMAR014806 I 0.000
SMUV_0001027601 Syphacia muris SMUV_0001027601 I 0.000
SPAL_0001536200 Strongyloides papillosus SPAL_0001536200 I 0.000
SPU_021150 Strongylocentrotus purpuratus SPU_021150 I 0.000
SSTP_0000025200 Strongyloides stercoralis SSTP_0000025200 I 0.000
SVE_0152400 Strongyloides venezuelensis SVE_0152400 I 0.000
SVUK_0000058801 Strongylus vulgaris SVUK_0000058801 I 0.000
TCNE_0000328801 Toxocara canis TCNE_0000328801 I 0.000
ces-2 Caenorhabditis elegans WBGene00000469 D 0.000
WBGene00237430 Onchocerca volvulus WBGene00237430 I 0.000
WBGene00243299 Onchocerca volvulus WBGene00243299 I 0.000
WUBG_00008 Wuchereria bancrofti WUBG_00008 I 0.000
WUBG_01294 Wuchereria bancrofti WUBG_01294 I 0.000