CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000005668
(
Sarcophilus harrisii
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSSHAG00000005668
T311147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.970
0.970
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.970
0.970
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.970
0.970
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.970
0.970
TP73
M11196_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.970
0.970
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.958
0.958
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.958
0.958
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.867
0.867
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000006513
p53
1
166
YSPLLKKLYCQIAKTCPIQIKVSTPPPPGTVIRAMPVYKKAEHVTEVVKRCPNHELGRDFNEGQSAPASHLIRVEGSNLSQYVDDPVTGRQSVMVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLETRDGQVLGRRSFEGRICACPGRDRKADEDHY
Links
Other
p53
family TFs
Other
Sarcophilus harrisii
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03621
Capronia coronata
A1O1_03621
N
0.000
A1O5_07945
Cladophialophora psammophila
A1O5_07945
N
0.000
A1O7_05540
Cladophialophora yegresii
A1O7_05540
N
0.000
A1O9_03728
Exophiala aquamarina
A1O9_03728
N
0.000
AB01725.1
Alternaria brassicicola
AB01725.1
N
0.000
BBA_01486
Beauveria bassiana
BBA_01486
N
0.000
CCM_05346
Cordyceps militaris
CCM_05346
N
0.000
CIMG_08698
Coccidioides immitis
CIMG_08698
N
0.000
COCC4DRAFT_151267
Bipolaris maydis
COCC4DRAFT_151267
N
0.000
COCCADRAFT_88870
Bipolaris zeicola
COCCADRAFT_88870
N
0.000
COCMIDRAFT_99367
Bipolaris oryzae
COCMIDRAFT_99367
N
0.000
COCSADRAFT_312964
Bipolaris sorokiniana
COCSADRAFT_312964
N
0.000
COCVIDRAFT_40098
Bipolaris victoriae
COCVIDRAFT_40098
N
0.000
FPSE_11291
Fusarium pseudograminearum
FPSE_11291
N
0.000
G647_09706
Cladophialophora carrionii
G647_09706
N
0.000
GMDG_04003
Pseudogymnoascus destructans
GMDG_04003
N
0.000
GSTUM_00000679001
Tuber melanosporum
GSTUM_00000679001
N
0.000
HMPREF1120_01168
Exophiala dermatitidis
HMPREF1120_01168
N
0.000
HMPREF1541_01199
Cyphellophora europaea
HMPREF1541_01199
N
0.000
MAM_03883
Metarhizium album
MAM_03883
N
0.000
PV04_05906
Capronia semiimmersa
PV04_05906
N
0.000
PV05_04590
Exophiala xenobiotica
PV05_04590
N
0.000
PV06_01163
Exophiala oligosperma
PV06_01163
N
0.000
PV07_04349
Cladophialophora immunda
PV07_04349
N
0.000
PV10_06983
Exophiala mesophila
PV10_06983
N
0.000
S40285_01002
Stachybotrys chlorohalonata
S40285_01002
N
0.000
S40288_05338
Stachybotrys chartarum
S40288_05338
N
0.000
SAPIO_CDS7323
Scedosporium apiospermum
SAPIO_CDS7323
N
0.000
SETTUDRAFT_155086
Setosphaeria turcica
SETTUDRAFT_155086
N
0.000
U727_00431202221
Penicillium solitum
U727_00431202221
N
0.000
UREG_02683
Uncinocarpus reesii
UREG_02683
N
0.000
V499_03492
Pseudogymnoascus pannorum
V499_03492
N
0.000
Z517_04112
Fonsecaea pedrosoi
Z517_04112
N
0.000
Z519_07787
Cladophialophora bantiana
Z519_07787
N
0.000