Pvit_07832 (Pogona vitticeps)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00870 (P53) IPR011615 Pvit_07832 T311249_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Trp63
M09338_2.00 		Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH		 Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B 		1.000 1.000
Trp73
M03438_2.00 		Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH		 SELEX
Jolma et al.(2013)
Tp73_1 		0.857 0.857
TP73
M08035_2.00 		Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin 		0.857 0.857
TP73
M08036_2.00 		Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle 		0.857 0.857
TP73
M08037_2.00 		Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY		 ChIP-seq
Chen et al.(2011)
GSE18650_TP73 		0.857 0.857
TP73
M09336_2.00 		Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A 		0.857 0.857
Trp73
M09339_2.00 		Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B 		0.857 0.857
TP73
M11196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P73_Q6 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_07832 p53 100 296

Links

Other p53 family TFs
Other Pogona vitticeps TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006277 Oryza indica BGIOSGA006277 N 0.000
BGIOSGA022378 Oryza indica BGIOSGA022378 N 0.000
BGIOSGA037035 Oryza indica BGIOSGA037035 N 0.000
BRADI1G48350 Brachypodium distachyon BRADI1G48350 N 0.000
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N 0.000
GRMZM2G034868 Zea mays GRMZM2G034868 N 0.000
GRMZM2G043250 Zea mays GRMZM2G043250 N 0.000
GRMZM2G048987 Zea mays GRMZM2G048987 N 0.000
MLOC_13034 Hordeum vulgare MLOC_13034 N 0.000
MLOC_43316 Hordeum vulgare MLOC_43316 N 0.000
OB02G27690 Oryza brachyantha OB02G27690 N 0.000
OB06G14070 Oryza brachyantha OB06G14070 N 0.000
OB12G13670 Oryza brachyantha OB12G13670 N 0.000
OLONG_000187 Oryza longistaminata OLONG_000187 N 0.000
OLONG_002410 Oryza longistaminata OLONG_002410 N 0.000
OLONG_014957 Oryza longistaminata OLONG_014957 N 0.000
ONIVA02G22250 Oryza nivara ONIVA02G22250 N 0.000
ONIVA06G05610 Oryza nivara ONIVA06G05610 N 0.000
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N 0.000
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N 0.000
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N 0.000
OS02G0550900 Oryza sativa OS02G0550900 N 0.000
OS06G0166100 Oryza sativa OS06G0166100 N 0.000
OS12G0160900 Oryza sativa OS12G0160900 N 0.000
Pavir.Aa01718 Panicum virgatum Pavir.Aa01718 N 0.000
Pavir.Ab01899 Panicum virgatum Pavir.Ab01899 N 0.000
Pavir.Ba00843 Panicum virgatum Pavir.Ba00843 N 0.000
Pavir.Bb02863 Panicum virgatum Pavir.Bb02863 N 0.000
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N 0.000
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N 0.000
Sb02g034560 Sorghum bicolor Sb02g034560 N 0.000
Sb04g022400 Sorghum bicolor Sb04g022400 N 0.000
Sb08g003780 Sorghum bicolor Sb08g003780 N 0.000
Si009370m.g Setaria italica Si009370m.g N 0.000
Si016477m.g Setaria italica Si016477m.g N 0.000
Si029002m.g Setaria italica Si029002m.g N 0.000
Traes_4AL_8B3A3CC2F Triticum aestivum Traes_4AL_8B3A3CC2F N 0.000
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N 0.000
Traes_7DS_016F8E2EA Triticum aestivum Traes_7DS_016F8E2EA N 0.000
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N 0.000
TRIUR3_03719 Triticum urartu TRIUR3_03719 N 0.000